Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   DQM67_RS03340 Genome accession   NZ_LS483383
Coordinates   655781..656785 (+) Length   334 a.a.
NCBI ID   WP_005590686.1    Uniprot ID   A0A0F2CN82
Organism   Streptococcus cristatus ATCC 51100 strain NCTC 12479     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 650781..661785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM67_RS03330 (NCTC12479_00638) ftsW 651442..652656 (+) 1215 WP_005590688.1 cell division peptidoglycan polymerase FtsW -
  DQM67_RS03335 (NCTC12479_00639) ppc 652704..655550 (+) 2847 WP_005590687.1 phosphoenolpyruvate carboxylase -
  DQM67_RS03340 (NCTC12479_00640) ccpA 655781..656785 (+) 1005 WP_005590686.1 catabolite control protein A Regulator
  DQM67_RS03345 (NCTC12479_00641) - 657109..660219 (+) 3111 WP_005590684.1 DNA polymerase III subunit alpha -
  DQM67_RS03350 (NCTC12479_00642) pfkA 660304..661314 (+) 1011 WP_005590682.1 6-phosphofructokinase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37104.25 Da        Isoelectric Point: 6.6661

>NTDB_id=1139499 DQM67_RS03340 WP_005590686.1 655781..656785(+) (ccpA) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVELLAKRNKKIAFVSGPLVDDINGKIRLSGYKEALKGKKISYSEGLVFESKYSYDDGYHLAERLIASK
ATAAFVTGDELAAGLLNGLADRGVRIPEDFEIITSDDSQIARFTRPNLSTIGQPLYDIGAISMRMLTKIMHKEELEEREV
LLAHTINERKSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1139499 DQM67_RS03340 WP_005590686.1 655781..656785(+) (ccpA) [Streptococcus cristatus ATCC 51100 strain NCTC 12479]
ATGAACACAGACGACACAGTAACCATTTATGATGTCGCCCGTGAAGCGGGAGTTTCAATGGCGACAGTCAGCCGAGTTGT
AAATGGTAACAAGAATGTAAAAGAAAATACACGAAAAAAAGTACTAGAAGTAATTGAACGTCTTGACTATCGTCCTAATG
CAGTTGCCCGTGGTTTGGCCAGCAAAAAGACAACTACAGTTGGTGTTGTAATTCCTAATATCACGAATAGTTACTTCTCT
ACTTTAGCTAAAGGGATTGATGATATTGCCGAAATGTATAAGTACAATATCGTCCTGGCAAACAGCGATGAAGATGATGA
CAAGGAAGTTTCGGTTGTTAATACCCTTTTCTCTAAGCAAGTAGATGGTATTATTTTTATGGGTTACCATCTGACAGAGA
AAATTCGCTCAGAATTTTCACGTTCACGGACACCAGTGGTTCTAGCGGGCACGGTGGATGTAGAACATCAGTTACCAAGT
GTCAATATTGATTATAAACAGGCAACGGTTGATGCTGTGGAACTATTGGCTAAACGCAACAAGAAAATTGCTTTTGTCAG
CGGTCCTTTGGTAGATGATATCAATGGTAAAATCCGCTTGTCTGGCTACAAAGAAGCTCTGAAGGGCAAGAAAATTTCAT
ACAGCGAAGGCTTGGTCTTCGAGTCTAAATATAGCTATGATGATGGTTATCATCTAGCTGAACGTCTGATTGCTTCAAAG
GCAACGGCGGCTTTTGTGACCGGAGATGAGTTGGCAGCAGGTTTGCTTAATGGTTTGGCTGATCGAGGTGTTCGTATTCC
TGAAGACTTTGAAATCATTACTAGCGATGATTCGCAAATTGCTCGCTTTACTCGCCCTAATCTGTCTACTATCGGACAAC
CTCTGTATGACATCGGTGCGATTAGTATGCGGATGCTGACGAAGATTATGCATAAAGAAGAGTTGGAAGAGCGCGAAGTT
CTCTTAGCTCATACGATCAATGAACGTAAATCGACTCGTAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0F2CN82

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

92.216

100

0.922
  ccpA Streptococcus pneumoniae D39

88.024

100

0.88
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.798

99.102

0.563

Multiple sequence alignment