Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | Q426_RS07105 | Genome accession | NZ_CP006770 |
| Coordinates | 1527826..1528314 (-) | Length | 162 a.a. |
| NCBI ID | WP_038674547.1 | Uniprot ID | A0A380JNM1 |
| Organism | Streptococcus equi subsp. zooepidemicus CY | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1522826..1533314
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q426_RS07090 (Q426_07545) | - | 1525312..1526256 (+) | 945 | WP_014622324.1 | magnesium transporter CorA family protein | - |
| Q426_RS07095 (Q426_07555) | - | 1526511..1527161 (+) | 651 | WP_012514999.1 | DUF1129 domain-containing protein | - |
| Q426_RS07100 (Q426_07560) | rpsR | 1527428..1527667 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| Q426_RS07105 (Q426_07565) | ssbA | 1527826..1528314 (-) | 489 | WP_038674547.1 | single-stranded DNA-binding protein | Machinery gene |
| Q426_RS07110 (Q426_07570) | rpsF | 1528333..1528623 (-) | 291 | WP_012678504.1 | 30S ribosomal protein S6 | - |
| Q426_RS07115 (Q426_07580) | - | 1529685..1529910 (-) | 226 | Protein_1411 | HicB family protein | - |
| Q426_RS07120 (Q426_07585) | mutY | 1529999..1531147 (+) | 1149 | WP_014622317.1 | A/G-specific adenine glycosylase | - |
| Q426_RS07125 (Q426_07590) | - | 1531437..1531712 (+) | 276 | WP_038674551.1 | hypothetical protein | - |
| Q426_RS07130 (Q426_07595) | - | 1531929..1532213 (+) | 285 | WP_021320372.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 162 a.a. Molecular weight: 17822.66 Da Isoelectric Point: 4.9008
>NTDB_id=113910 Q426_RS07105 WP_038674547.1 1527826..1528314(-) (ssbA) [Streptococcus equi subsp. zooepidemicus CY]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREANSSGSYGGGFNSSPATNSYSAPAQQTPNFGRDESPFGGSNPMDISDDDL
PF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREANSSGSYGGGFNSSPATNSYSAPAQQTPNFGRDESPFGGSNPMDISDDDL
PF
Nucleotide
Download Length: 489 bp
>NTDB_id=113910 Q426_RS07105 WP_038674547.1 1527826..1528314(-) (ssbA) [Streptococcus equi subsp. zooepidemicus CY]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGACGCAGAGCTTCGATACACTCCAAGTCAGGTGGCAGTTGC
TACGTTTACACTTGCTGTTAATCGCGCCTTTAAGAGCCAAAATGGTGAGCGCGAAGCGGATTTCATTAACTGTGTGATCT
GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCCAAAAAGGGTGCCTTGATTGGGATTACGGGACGTATTCAGACTCGT
AACTACGAAAACCAACAGGGACAGCGTGTGTATGTAACCGAGGTTGTTGCAGATAATTTCCAAATGCTGGAAAGTCGTGC
TACACGTGAGGCGAACTCGTCTGGCTCATATGGTGGTGGTTTTAATAGCTCACCGGCAACCAATAGTTATTCAGCGCCTG
CTCAGCAAACACCTAACTTTGGCAGAGATGAAAGTCCATTTGGCGGCTCAAATCCAATGGATATTTCAGATGACGATCTT
CCATTCTAA
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGACGCAGAGCTTCGATACACTCCAAGTCAGGTGGCAGTTGC
TACGTTTACACTTGCTGTTAATCGCGCCTTTAAGAGCCAAAATGGTGAGCGCGAAGCGGATTTCATTAACTGTGTGATCT
GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCCAAAAAGGGTGCCTTGATTGGGATTACGGGACGTATTCAGACTCGT
AACTACGAAAACCAACAGGGACAGCGTGTGTATGTAACCGAGGTTGTTGCAGATAATTTCCAAATGCTGGAAAGTCGTGC
TACACGTGAGGCGAACTCGTCTGGCTCATATGGTGGTGGTTTTAATAGCTCACCGGCAACCAATAGTTATTCAGCGCCTG
CTCAGCAAACACCTAACTTTGGCAGAGATGAAAGTCCATTTGGCGGCTCAAATCCAATGGATATTTCAGATGACGATCTT
CCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.046 |
100 |
0.623 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
57.895 |
100 |
0.611 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
54.955 |
68.519 |
0.377 |