Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | DQM66_RS09870 | Genome accession | NZ_LS483374 |
| Coordinates | 1840594..1840896 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413382.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain NCTC7466 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1835594..1845896
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM66_RS09840 (NCTC7466_01889) | rnpA | 1836273..1836644 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| DQM66_RS11745 | - | 1836661..1836792 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| DQM66_RS09845 (NCTC7466_01890) | - | 1836793..1837983 (-) | 1191 | WP_000167757.1 | acetate kinase | - |
| DQM66_RS09850 (NCTC7466_01891) | comYH | 1838034..1838987 (-) | 954 | WP_000345135.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQM66_RS09855 | - | 1839048..1839642 (-) | 595 | Protein_1837 | class I SAM-dependent methyltransferase | - |
| DQM66_RS09860 (NCTC7466_01894) | comGG/cglG | 1839779..1840192 (-) | 414 | WP_000265622.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| DQM66_RS09865 (NCTC7466_01895) | comGF/cglF | 1840170..1840631 (-) | 462 | WP_000250534.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQM66_RS09870 (NCTC7466_01896) | comGE/cglE | 1840594..1840896 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DQM66_RS09875 (NCTC7466_01897) | comGD/cglD | 1840859..1841263 (-) | 405 | WP_000588026.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DQM66_RS09880 (NCTC7466_01898) | comGC/cglC | 1841256..1841582 (-) | 327 | WP_000738626.1 | comG operon protein ComGC | Machinery gene |
| DQM66_RS09885 (NCTC7466_01899) | comGB/cglB | 1841584..1842600 (-) | 1017 | WP_074196785.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQM66_RS09890 (NCTC7466_01900) | comGA/cglA/cilD | 1842548..1843489 (-) | 942 | WP_000249564.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM66_RS09895 (NCTC7466_01901) | - | 1843565..1843930 (-) | 366 | WP_000286412.1 | DUF1033 family protein | - |
| DQM66_RS09900 (NCTC7466_01902) | - | 1844081..1845139 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11108.08 Da Isoelectric Point: 9.7273
>NTDB_id=1139078 DQM66_RS09870 WP_000413382.1 1840594..1840896(-) (comGE/cglE) [Streptococcus pneumoniae strain NCTC7466]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=1139078 DQM66_RS09870 WP_000413382.1 1840594..1840896(-) (comGE/cglE) [Streptococcus pneumoniae strain NCTC7466]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
98 |
100 |
0.98 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |