Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   DQM66_RS09565 Genome accession   NZ_LS483374
Coordinates   1791317..1792327 (-) Length   336 a.a.
NCBI ID   WP_000990602.1    Uniprot ID   A0A0H2ZQ65
Organism   Streptococcus pneumoniae strain NCTC7466     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1786317..1797327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM66_RS09535 (NCTC7466_01830) - 1786337..1787551 (-) 1215 WP_000666469.1 pyridoxal phosphate-dependent aminotransferase -
  DQM66_RS09540 (NCTC7466_01831) - 1787707..1788000 (-) 294 WP_000977365.1 hypothetical protein -
  DQM66_RS09545 (NCTC7466_01832) - 1788162..1788614 (+) 453 WP_000079154.1 universal stress protein -
  DQM66_RS09550 (NCTC7466_01833) - 1788649..1790037 (-) 1389 WP_000453139.1 Cof-type HAD-IIB family hydrolase -
  DQM66_RS09555 (NCTC7466_01834) - 1790103..1791065 (+) 963 WP_001124777.1 asparaginase -
  DQM66_RS09560 - 1791062..1791253 (-) 192 WP_001092029.1 hypothetical protein -
  DQM66_RS09565 (NCTC7466_01835) ccpA 1791317..1792327 (-) 1011 WP_000990602.1 catabolite control protein A Regulator
  DQM66_RS09570 (NCTC7466_01836) - 1792752..1793351 (-) 600 WP_000866719.1 response regulator transcription factor -
  DQM66_RS09575 (NCTC7466_01837) - 1793353..1794450 (-) 1098 WP_000893546.1 sensor histidine kinase -
  DQM66_RS09580 (NCTC7466_01838) - 1794450..1795187 (-) 738 WP_000832834.1 ABC transporter permease -
  DQM66_RS09585 (NCTC7466_01839) - 1795189..1796073 (-) 885 WP_000219348.1 ABC transporter ATP-binding protein -
  DQM66_RS09590 (NCTC7466_01840) - 1796060..1796254 (-) 195 WP_000820180.1 hypothetical protein -
  DQM66_RS09595 (NCTC7466_01841) - 1796251..1796457 (-) 207 WP_000503437.1 hypothetical protein -

Sequence

Protein


Download         Length: 336 a.a.        Molecular weight: 37042.99 Da        Isoelectric Point: 5.3212

>NTDB_id=1139072 DQM66_RS09565 WP_000990602.1 1791317..1792327(-) (ccpA) [Streptococcus pneumoniae strain NCTC7466]
MNADDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTATVGVVIPNITNGYFS
SLAKGIDDIAEMYKYNIVLANSDEDNEKEVSVVNTLFSKQVDGIIYMGYHLTDKIRSEFSRSRTPIVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLAKENERIAFVSGPLVDDINGKVRLVGYKETLKKAGITYSEGLVFESKYSYDDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEDFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERSSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=1139072 DQM66_RS09565 WP_000990602.1 1791317..1792327(-) (ccpA) [Streptococcus pneumoniae strain NCTC7466]
ATGAATGCAGATGATACAGTAACCATTTATGATGTCGCTCGTGAAGCAGGTGTTTCCATGGCGACGGTCAGCCGTGTGGT
CAATGGCAATAAAAATGTAAAAGAGAATACCCGTAAAAAAGTGCTAGAGGTAATTGATCGTTTGGATTATCGTCCAAATG
CAGTTGCGCGTGGTCTTGCAAGTAAAAAGACAGCCACTGTCGGTGTCGTGATTCCAAATATTACCAATGGTTATTTTTCG
AGTTTGGCTAAGGGGATTGATGATATTGCAGAAATGTACAAGTACAATATTGTCCTAGCTAATAGCGATGAAGATAACGA
GAAAGAAGTTTCTGTTGTCAATACCCTCTTTTCAAAGCAGGTAGATGGCATTATCTATATGGGTTATCACTTGACAGATA
AAATTCGCTCAGAATTTTCGCGTTCACGTACTCCGATTGTTCTCGCAGGAACTGTCGATGTTGAGCACCAGTTGCCAAGT
GTCAATATTGACTATAAGCAAGCAACAATTGATGCAGTGAGTTACCTTGCTAAAGAAAATGAGCGTATTGCTTTCGTTAG
CGGTCCGCTAGTGGATGACATCAATGGTAAGGTTCGTTTAGTTGGCTACAAGGAAACCTTGAAAAAAGCAGGAATCACTT
ATAGTGAGGGTTTGGTATTTGAATCTAAATATAGCTATGATGATGGTTACGCCTTAGCAGAGCGTTTGATTTCATCAAAT
GCAACTGCAGCAGTTGTGACAGGTGATGAGTTGGCAGCAGGAGTCTTGAACGGTTTGGCTGATAAAGGTGTTTCTGTGCC
AGAAGATTTTGAAATTATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACAACGATTGCCCAAC
CTCTTTATGACCTTGGTGCTATTAGTATGCGTATGTTGACCAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTAGCTCAACACGAAAACGTAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZQ65

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

100

100

1
  ccpA Streptococcus gordonii str. Challis substr. CH1

86.826

99.405

0.863
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

98.512

0.565

Multiple sequence alignment