Detailed information NTG1138961

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: DQM57_RS07760
• Genome accession: NZ_LS483369
• Coordinates: 1497798..1498247 (-)
• Length: 149 a.a.
• NCBI ID: WP_003678313.1
• Uniprot ID: A0A7T3BM96
• Organism: Neisseria cinerea strain NCTC10294
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1496393..1505300	1497798..1498247	within	0

Gene organization within MGE regions

Location: 1496393..1505300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM57_RS09695 (NCTC10294_01470)	-	1496393..1496545 (+)	153	WP_167395565.1	hypothetical protein	-
DQM57_RS07755 (NCTC10294_01471)	-	1496676..1497737 (+)	1062	WP_230698763.1	5'-nucleotidase	-
DQM57_RS07760 (NCTC10294_01472)	comP	1497798..1498247 (-)	450	WP_003678313.1	type IV pilin protein	Machinery gene
DQM57_RS07765 (NCTC10294_01473)	-	1498334..1498722 (-)	389	Protein_1437	helix-hairpin-helix domain-containing protein	-
DQM57_RS07800 (NCTC10294_01479)	-	1504494..1505300 (-)	807	WP_107860402.1	inner membrane protein YpjD	-

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 16739.53 Da
• Isoelectric Point: 9.1383

>NTDB_id=1138961 DQM57_RS07760 WP_003678313.1 1497798..1498247(-) (comP) [Neisseria cinerea strain NCTC10294]
MTDNRGFTLVELISVVLILSVLALIAYPIYSNYIEKARISAVRSALLENAHFMEKFYLQNGTFKQTSTKWPKLPIQEAEG
FCIRLNGVARGALDSKFMLKAVAIDKNKEPRIIKMNENLVTFVCKGSTSSCDDGLDYFRGNDKGCTLFK

Nucleotide

• Length: 450 bp

>NTDB_id=1138961 DQM57_RS07760 WP_003678313.1 1497798..1498247(-) (comP) [Neisseria cinerea strain NCTC10294]
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTAGTTTTGATATTGTCTGTACTTGCTCTAATTGCTTA
TCCAATCTACAGTAATTATATTGAAAAGGCTAGAATAAGTGCGGTACGCTCGGCTTTATTAGAGAATGCACATTTTATGG
AAAAGTTTTATCTACAAAATGGGACATTTAAACAAACATCTACTAAGTGGCCAAAGTTACCGATTCAAGAGGCTGAGGGT
TTTTGTATTCGGTTGAATGGGGTTGCGAGAGGTGCGTTGGACAGTAAGTTTATGTTGAAGGCAGTTGCCATAGATAAAAA
TAAAGAGCCTCGTATTATTAAGATGAATGAGAATTTGGTAACTTTTGTTTGTAAAGGATCTACCAGTTCTTGTGATGATG
GATTAGATTATTTTAGGGGTAATGATAAGGGTTGTACATTATTTAAGTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (28-107)

3D structure

• AlphaFold DB: A0A7T3BM96

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria meningitidis 8013	85.906	100	0.859
comP	Neisseria gonorrhoeae MS11	85.235	100	0.852
comP	Neisseria subflava NJ9703	50.667	100	0.51