Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   Q426_RS01940 Genome accession   NZ_CP006770
Coordinates   412186..413187 (+) Length   333 a.a.
NCBI ID   WP_012516008.1    Uniprot ID   A1E373
Organism   Streptococcus equi subsp. zooepidemicus CY     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 407186..418187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q426_RS01920 (Q426_02045) - 408081..408932 (-) 852 WP_014623210.1 helix-turn-helix domain-containing protein -
  Q426_RS01925 (Q426_02055) - 409170..410753 (+) 1584 WP_038674130.1 ABC transporter ATP-binding protein -
  Q426_RS01935 (Q426_02065) - 410927..412012 (-) 1086 WP_038674132.1 M24 family metallopeptidase -
  Q426_RS01940 (Q426_02070) ccpA 412186..413187 (+) 1002 WP_012516008.1 catabolite control protein A Regulator
  Q426_RS01945 (Q426_02075) - 413257..414732 (+) 1476 WP_038674134.1 alpha-amylase -
  Q426_RS01950 (Q426_02080) - 415016..416014 (+) 999 WP_014623205.1 glycosyltransferase family 4 protein -
  Q426_RS01955 (Q426_02085) - 416016..417350 (+) 1335 WP_014623204.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36631.75 Da        Isoelectric Point: 5.7642

>NTDB_id=113889 Q426_RS01940 WP_012516008.1 412186..413187(+) (ccpA) [Streptococcus equi subsp. zooepidemicus CY]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=113889 Q426_RS01940 WP_012516008.1 412186..413187(+) (ccpA) [Streptococcus equi subsp. zooepidemicus CY]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAACGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATCCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATCGTTCTTGCTTCAAGCGATGAGGACGACGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGTGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGAGCTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGTAAGCGTGTTCC
AGAGGACTTTGAGATTATCACAAGCAATGATTCTCCAGTGGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGCCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1E373

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547

Multiple sequence alignment