Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   DQM55_RS04085 Genome accession   NZ_LS483364
Coordinates   777405..778409 (+) Length   334 a.a.
NCBI ID   WP_002894913.1    Uniprot ID   A0A0B7GRU9
Organism   Streptococcus sanguinis strain NCTC11086     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 772405..783409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM55_RS04065 (NCTC11086_00802) - 772845..773873 (-) 1029 WP_111675553.1 ABC transporter substrate-binding protein -
  DQM55_RS04070 (NCTC11086_00803) - 773929..774684 (-) 756 WP_111675554.1 ABC transporter ATP-binding protein -
  DQM55_RS04075 (NCTC11086_00804) - 774686..775732 (-) 1047 WP_061595103.1 FecCD family ABC transporter permease -
  DQM55_RS04080 (NCTC11086_00805) - 776160..777242 (-) 1083 WP_111675555.1 M24 family metallopeptidase -
  DQM55_RS04085 (NCTC11086_00806) ccpA 777405..778409 (+) 1005 WP_002894913.1 catabolite control protein A Regulator
  DQM55_RS04090 (NCTC11086_00807) - 778654..779652 (+) 999 WP_032912409.1 glycosyltransferase family 4 protein -
  DQM55_RS04095 (NCTC11086_00808) - 779654..780976 (+) 1323 WP_111675556.1 glycosyltransferase family 4 protein -
  DQM55_RS04100 (NCTC11086_00809) - 781048..781527 (+) 480 WP_111675557.1 hypothetical protein -
  DQM55_RS04105 (NCTC11086_00811) - 781793..782437 (+) 645 WP_172454712.1 AAA family ATPase -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 37010.05 Da        Isoelectric Point: 6.3717

>NTDB_id=1138664 DQM55_RS04085 WP_002894913.1 777405..778409(+) (ccpA) [Streptococcus sanguinis strain NCTC11086]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVELLAKRNKKIAFVSGPLVDDINGKIRLSGYKDGLKNKKLSYSEGLVFESKYSYDDGYHLAERVIASK
ATAAFVTGDELAAGLLNGLSDQGIKVPEDFEIITSDDSQVARFTRPNLSTIGQPLYDIGAISMRMLTKIMHKEELEEREV
LLAHSISERKSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1138664 DQM55_RS04085 WP_002894913.1 777405..778409(+) (ccpA) [Streptococcus sanguinis strain NCTC11086]
ATGAACACAGACGACACAGTAACGATTTATGATGTCGCCCGTGAAGCGGGAGTTTCGATGGCGACAGTCAGTCGAGTAGT
GAATGGAAACAAGAACGTCAAAGAAAACACACGTAAAAAAGTTTTAGAGGTCATTGATCGTCTTGACTATCGTCCAAATG
CAGTGGCACGTGGATTAGCCAGCAAGAAGACTACAACCGTCGGCGTTGTCATTCCAAATATTACCAATAGCTATTTCTCA
ACCTTGGCAAAAGGGATTGATGATATTGCCGAAATGTATAAATACAACATTGTCTTGGCTAACAGTGATGAGGATGATGA
TAAGGAAGTATCCGTTGTCAATACTCTCTTTTCTAAACAGGTGGATGGCATTATTTTCATGGGCTATCATCTGACGGAGA
AAATTCGCTCAGAGTTTTCACGTTCGCGCACACCGGTCGTTTTGGCGGGTACTGTCGATGTGGAGCATCAGCTTCCAAGC
GTTAATATTGACTACAAGCAAGCAACGGTTGATGCTGTAGAATTACTGGCTAAGCGCAATAAGAAAATTGCCTTTGTCAG
CGGACCGCTTGTAGATGATATCAACGGGAAAATCCGTCTATCAGGCTATAAAGATGGCTTGAAGAACAAGAAACTTTCAT
ACAGCGAAGGCTTGGTTTTTGAATCTAAATATTCTTATGATGATGGCTACCACCTCGCGGAGCGTGTCATTGCTTCCAAA
GCAACTGCAGCTTTTGTCACAGGAGATGAACTGGCGGCAGGCCTCTTAAATGGTCTGTCTGATCAAGGTATCAAAGTTCC
AGAAGATTTTGAAATCATTACCAGTGATGATTCGCAAGTCGCTCGTTTCACTCGTCCTAACCTCTCCACAATCGGTCAGC
CCCTCTATGACATCGGCGCTATCAGTATGCGCATGCTGACTAAGATTATGCATAAGGAAGAATTGGAAGAACGCGAAGTT
CTCCTAGCTCACAGCATTAGCGAGCGTAAATCAACTCGGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7GRU9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.916

100

0.919

  ccpA Streptococcus pneumoniae D39

86.826

100

0.868

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.102

0.551


Multiple sequence alignment