Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   DQM73_RS12270 Genome accession   NZ_LS483346
Coordinates   2448553..2449314 (+) Length   253 a.a.
NCBI ID   WP_002927422.1    Uniprot ID   A0A2X3VZT1
Organism   Streptococcus sanguinis strain NCTC11085     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2443553..2454314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM73_RS12240 (NCTC11085_02410) comE 2444097..2444861 (-) 765 WP_002899424.1 competence system response regulator transcription factor ComE Regulator
  DQM73_RS12245 (NCTC11085_02411) comD 2444867..2446201 (-) 1335 WP_002927417.1 competence system sensor histidine kinase ComD -
  DQM73_RS12250 (NCTC11085_02412) - 2446229..2446336 (-) 108 WP_002894290.1 hypothetical protein -
  DQM73_RS12260 (NCTC11085_02414) rlmH 2446634..2447113 (-) 480 WP_002927418.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DQM73_RS12265 (NCTC11085_02415) htrA 2447317..2448489 (+) 1173 WP_002927420.1 S1C family serine protease Regulator
  DQM73_RS12270 (NCTC11085_02416) spo0J 2448553..2449314 (+) 762 WP_002927422.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 253 a.a.        Molecular weight: 29434.22 Da        Isoelectric Point: 9.5189

>NTDB_id=1137734 DQM73_RS12270 WP_002927422.1 2448553..2449314(+) (spo0J) [Streptococcus sanguinis strain NCTC11085]
MENFQYIALKDIRTNPYQPRKQFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGERRFRAASFLGLETIPAVVKE
LSDDEMLKQAIIENLQREDLNPIEEAESYQNLIDKGLTHDEIAKIMGKSRPYISNIVRLLQLSKEVRQAIKEEEISQGHA
RLLVPLKEEEQLLWLEKIYREDLSVRAVEKLLQKKKSLKKKPNKELFAKSEEEKIKKILGLEVSIQLKSQSKGKLIIPFE
SEEEYQRIINSFK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=1137734 DQM73_RS12270 WP_002927422.1 2448553..2449314(+) (spo0J) [Streptococcus sanguinis strain NCTC11085]
ATGGAAAACTTTCAATATATTGCACTTAAAGACATTCGAACCAATCCTTATCAGCCTCGTAAACAATTTTCACAAAAAAA
GATTGAAGAATTAGCGGCATCAATCAAAGAAAATGGTCTCATTCAGCCAATCATTCTTCGGAAATCTTCACTTTTTGGTT
ATGAAATTTTAGCAGGAGAACGGAGATTTAGAGCTGCCTCTTTTCTTGGCCTAGAAACGATCCCAGCTGTCGTCAAAGAA
TTATCTGATGATGAAATGCTGAAACAGGCCATTATCGAAAATCTTCAAAGAGAAGACTTGAATCCTATAGAAGAAGCTGA
GTCTTATCAAAATTTGATTGACAAAGGCTTGACACATGATGAAATTGCTAAAATCATGGGAAAATCTAGACCCTATATCA
GCAATATTGTCAGACTTTTACAGCTGTCTAAAGAAGTTCGTCAAGCTATCAAGGAAGAAGAGATTTCTCAAGGACATGCC
CGTCTGCTAGTTCCTTTAAAAGAAGAGGAACAGTTACTATGGCTGGAAAAAATCTATCGAGAAGATTTATCGGTTCGAGC
GGTTGAAAAGCTTCTCCAGAAAAAAAAGAGTCTCAAAAAGAAACCTAATAAAGAACTATTTGCTAAATCTGAAGAGGAAA
AAATTAAAAAAATTCTTGGTCTGGAAGTTTCTATTCAGTTAAAAAGCCAGAGTAAAGGAAAGCTGATTATTCCTTTTGAA
AGCGAAGAAGAATATCAAAGAATTATAAACAGTTTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2X3VZT1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

52.988

99.209

0.526


Multiple sequence alignment