Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   DQM73_RS08155 Genome accession   NZ_LS483346
Coordinates   1654088..1655092 (-) Length   334 a.a.
NCBI ID   WP_002894913.1    Uniprot ID   A0A0B7GRU9
Organism   Streptococcus sanguinis strain NCTC11085     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1649088..1660092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM73_RS08135 (NCTC11085_01596) - 1650057..1650701 (-) 645 WP_002923945.1 hypothetical protein -
  DQM73_RS08140 (NCTC11085_01598) - 1650963..1651445 (-) 483 WP_002934264.1 hypothetical protein -
  DQM73_RS08145 (NCTC11085_01599) - 1651517..1652839 (-) 1323 WP_002934263.1 glycosyltransferase family 4 protein -
  DQM73_RS08150 (NCTC11085_01600) - 1652841..1653839 (-) 999 WP_002923934.1 glycosyltransferase family 4 protein -
  DQM73_RS08155 (NCTC11085_01601) ccpA 1654088..1655092 (-) 1005 WP_002894913.1 catabolite control protein A Regulator
  DQM73_RS08160 (NCTC11085_01602) - 1655255..1656337 (+) 1083 WP_002923933.1 Xaa-Pro peptidase family protein -
  DQM73_RS08165 (NCTC11085_01603) - 1656851..1657897 (+) 1047 WP_002923931.1 iron ABC transporter permease -
  DQM73_RS08170 (NCTC11085_01604) - 1657899..1658654 (+) 756 WP_002923928.1 ABC transporter ATP-binding protein -
  DQM73_RS08175 (NCTC11085_01605) - 1658710..1659738 (+) 1029 WP_002923924.1 ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 37010.05 Da        Isoelectric Point: 6.3717

>NTDB_id=1137710 DQM73_RS08155 WP_002894913.1 1654088..1655092(-) (ccpA) [Streptococcus sanguinis strain NCTC11085]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVELLAKRNKKIAFVSGPLVDDINGKIRLSGYKDGLKNKKLSYSEGLVFESKYSYDDGYHLAERVIASK
ATAAFVTGDELAAGLLNGLSDQGIKVPEDFEIITSDDSQVARFTRPNLSTIGQPLYDIGAISMRMLTKIMHKEELEEREV
LLAHSISERKSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1137710 DQM73_RS08155 WP_002894913.1 1654088..1655092(-) (ccpA) [Streptococcus sanguinis strain NCTC11085]
ATGAACACAGACGACACAGTAACGATTTATGATGTCGCCCGTGAAGCGGGAGTTTCGATGGCGACAGTCAGTCGAGTAGT
GAATGGAAACAAGAACGTCAAAGAAAACACACGTAAAAAAGTTTTAGAGGTCATTGATCGTCTTGACTATCGTCCAAATG
CAGTGGCACGTGGACTAGCCAGTAAGAAGACTACAACCGTAGGCGTTGTCATTCCAAATATTACCAATAGCTATTTCTCA
ACCTTGGCAAAAGGGATTGATGATATTGCCGAAATGTATAAATACAATATTGTCTTGGCTAACAGTGATGAGGACGATGA
TAAGGAAGTCTCCGTTGTCAATACGCTCTTTTCTAAGCAGGTGGATGGCATTATTTTCATGGGCTATCATCTGACGGAGA
AAATTCGCTCAGAGTTTTCACGTTCACGCACACCGGTCGTTTTGGCGGGTACTGTCGATGTGGAGCATCAGCTTCCGAGC
GTTAATATTGACTACAAGCAAGCAACGGTTGATGCTGTAGAATTACTGGCTAAGCGCAATAAGAAAATTGCCTTTGTCAG
TGGGCCGCTTGTAGATGATATCAACGGGAAAATCCGTCTATCAGGCTATAAAGATGGCTTGAAGAACAAGAAACTTTCTT
ACAGCGAAGGCTTGGTTTTTGAATCAAAATATTCTTATGATGATGGCTACCACTTGGCAGAGCGTGTTATTGCTTCCAAA
GCAACAGCGGCTTTTGTCACAGGAGATGAACTGGCAGCAGGCCTCTTAAATGGTCTATCTGATCAAGGCATCAAGGTTCC
AGAAGATTTTGAAATCATTACCAGTGATGATTCGCAAGTAGCTCGTTTCACTCGTCCTAACCTTTCCACAATCGGTCAGC
CCCTCTATGACATCGGCGCTATCAGTATGCGCATGCTGACTAAGATTATGCATAAGGAAGAATTGGAAGAACGCGAAGTT
CTCCTAGCTCACAGCATTAGCGAGCGTAAATCAACTCGGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7GRU9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.916

100

0.919

  ccpA Streptococcus pneumoniae D39

86.826

100

0.868

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.102

0.551


Multiple sequence alignment