Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQM73_RS08090 Genome accession   NZ_LS483346
Coordinates   1641366..1642166 (-) Length   266 a.a.
NCBI ID   WP_002923959.1    Uniprot ID   A0A2X3V7D1
Organism   Streptococcus sanguinis strain NCTC11085     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1636366..1647166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM73_RS08075 (NCTC11085_01584) rnc 1638868..1639566 (-) 699 WP_002899941.1 ribonuclease III -
  DQM73_RS08080 (NCTC11085_01585) - 1639689..1640048 (-) 360 WP_032908117.1 YbaN family protein -
  DQM73_RS08085 (NCTC11085_01586) - 1640152..1641093 (-) 942 WP_002923960.1 hypothetical protein -
  DQM73_RS08090 (NCTC11085_01587) vicX 1641366..1642166 (-) 801 WP_002923959.1 MBL fold metallo-hydrolase Regulator
  DQM73_RS08095 (NCTC11085_01588) micB 1642176..1643525 (-) 1350 WP_002899938.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQM73_RS08100 (NCTC11085_01589) micA 1643518..1644219 (-) 702 WP_002894937.1 response regulator YycF Regulator
  DQM73_RS08105 (NCTC11085_01590) - 1644559..1645320 (+) 762 WP_002920730.1 amino acid ABC transporter ATP-binding protein -
  DQM73_RS08110 (NCTC11085_01591) - 1645335..1646147 (+) 813 WP_002923957.1 transporter substrate-binding domain-containing protein -
  DQM73_RS08115 (NCTC11085_01592) - 1646160..1646840 (+) 681 WP_002906090.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29652.66 Da        Isoelectric Point: 6.2773

>NTDB_id=1137707 DQM73_RS08090 WP_002923959.1 1641366..1642166(-) (vicX) [Streptococcus sanguinis strain NCTC11085]
MTKGFQYSILASGSSGNCFYLETDQKRILVDAGLSGKKITSLLGEIGRKPEDLDAILVTHEHKDHIHGVGVLARKYLLDI
YANKATWKAMEKDLGKLDASQKHIFELGKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIE
NADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLA
QADMAVGHDFQVYDTSPDTATPLTSI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=1137707 DQM73_RS08090 WP_002923959.1 1641366..1642166(-) (vicX) [Streptococcus sanguinis strain NCTC11085]
ATGACTAAAGGATTTCAATATAGTATTCTGGCGTCAGGATCAAGTGGTAACTGTTTCTATCTGGAAACAGATCAAAAGCG
GATTCTGGTTGACGCTGGCTTATCAGGCAAGAAAATTACGAGCTTGCTGGGCGAAATTGGCCGCAAGCCTGAGGATTTGG
ATGCCATTTTAGTGACTCATGAGCACAAGGACCACATTCATGGTGTTGGGGTATTGGCCCGCAAGTATCTTTTAGATATT
TATGCTAATAAGGCTACATGGAAGGCTATGGAAAAGGACTTGGGCAAGCTGGATGCGAGCCAAAAGCATATCTTTGAATT
GGGCAAGACCAAGACCTTTGGAGACTTGGATGTGGAGAGCTTTGGTGTCAGTCATGACGCAGCCTGTCCGCAGTTTTACC
GCTTTATGAAGGATGACAAGAGTTTTGTCATGCTGACGGATACAGGCTATGTCAGTGACCGGATGGCTGGGATTATCGAA
AATGCCGACGGGTACTTGATTGAGAGCAACCATGATATTGAAATTCTTCGCAGCGGTGCCTACCCTTGGAGCCTCAAGCA
GCGAATTCTGTCTGATATGGGCCATCTGTCCAATGAAGACGGAGCGGAGACCATGATTCGGACTCTGGGCAATCGTACCA
AGCGGATCTATCTAGGGCATCTCAGTAAGGAAAACAATATCAAGGAATTGGCCCACATGACCATGGTCAATCAACTGGCT
CAAGCCGATATGGCAGTCGGTCACGACTTCCAGGTTTATGATACTTCGCCTGATACCGCAACGCCTTTGACGAGTATTTA
A

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(27-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X3V7D1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.369

98.872

0.805

Multiple sequence alignment