Detailed information NTG1137687

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: DQM73_RS02285
• Genome accession: NZ_LS483346
• Coordinates: 439576..440502 (+)
• Length: 308 a.a.
• NCBI ID: WP_002925868.1
• Uniprot ID: A0A2X3VKC5
• Organism: Streptococcus sanguinis strain NCTC11085
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 434576..445502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM73_RS02270 (NCTC11085_00442)	amiC	436067..437563 (+)	1497	WP_002908885.1	ABC transporter permease	Regulator
DQM73_RS02275 (NCTC11085_00443)	amiD	437563..438489 (+)	927	WP_002898857.1	oligopeptide ABC transporter permease OppC	Regulator
DQM73_RS02280 (NCTC11085_00444)	amiE	438498..439565 (+)	1068	WP_002893620.1	ABC transporter ATP-binding protein	Regulator
DQM73_RS02285 (NCTC11085_00445)	amiF	439576..440502 (+)	927	WP_002925868.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34870.87 Da
• Isoelectric Point: 6.1170

>NTDB_id=1137687 DQM73_RS02285 WP_002925868.1 439576..440502(+) (amiF) [Streptococcus sanguinis strain NCTC11085]
MTEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDIFYEGKKINGKKSKA
EEADLIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFDSEEDRQRKVKDIINEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
HPVHPYTQSLLSAVPIPDPILERKKVLKVYDPDQHDYSVDKPEMSEIRPGHYVWANKAELEKYKQEQK

Nucleotide

• Length: 927 bp

>NTDB_id=1137687 DQM73_RS02285 WP_002925868.1 439576..440502(+) (amiF) [Streptococcus sanguinis strain NCTC11085]
ATGACTGAAAAATTAGTTGAAATTAAAGATTTAGAAATTTCCTTCGGCGAAGGAAGTAAGAAATTTGTGGCAGTTAAAAA
TGCAAATTTCTTCATCAATAAGGGGGAAACTTTCTCTCTTGTAGGAGAATCAGGCTCTGGTAAGACTACTATTGGTCGAG
CTATTATCGGCCTTAATGATACCAGTGCAGGTGATATCTTCTACGAAGGCAAAAAGATTAATGGTAAAAAGTCAAAAGCA
GAAGAAGCAGACTTGATTCGCAAGATTCAGATGATTTTCCAAGATCCAGCAGCCAGTCTGAATGAACGTGCAACGGTTGA
CTATATCATATCTGAGGGTCTTTATAATTACCATTTGTTTGATAGTGAAGAAGACCGTCAAAGAAAAGTCAAAGATATCA
TCAATGAAGTCGGTTTGTTGGCTGAGCATTTAACTCGCTATCCTCACGAATTCTCTGGTGGACAGCGTCAACGAATCGGG
ATTGCTCGTGCATTGGTCATGCAACCAGACTTCGTGATTGCTGATGAGCCGATTTCCGCCTTGGACGTATCTGTCCGAGC
ACAGGTCTTGAATCTTTTGAAAAAATTTCAAAAAGAGCTTGGCTTGACCTACCTGTTTATTGCCCATGACCTTTCGGTAG
TTCGTTTTATTTCTGATCGTATCGCCGTGATTTACAAAGGTGTCATTGTAGAAGTGGCAGAGACAGAGGAATTGTTCAAC
CATCCTGTCCACCCTTATACACAATCCCTGCTCTCAGCTGTTCCAATTCCAGACCCAATCTTGGAGCGTAAAAAAGTGTT
GAAGGTCTATGATCCTGACCAGCACGATTATTCTGTTGACAAACCAGAAATGTCTGAGATTCGTCCAGGACACTACGTCT
GGGCTAATAAAGCTGAACTCGAAAAGTATAAACAAGAACAAAAATAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

3D structure

• AlphaFold DB: A0A2X3VKC5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	85.668	99.675	0.854
amiF	Streptococcus thermophilus LMG 18311	85.016	99.675	0.847
amiF	Streptococcus thermophilus LMD-9	84.691	99.675	0.844