Detailed information NTG0113767

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: OB04_RS14000
• Genome accession: NZ_CP009796
• Coordinates: 2691159..2691764 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain SG6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2686159..2696764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OB04_RS13970 (OB04_02741)	-	2686972..2687361 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
OB04_RS13975 (OB04_02742)	yajC	2687418..2687684 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
OB04_RS13980 (OB04_02743)	tgt	2687721..2688866 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
OB04_RS13985 (OB04_02744)	queA	2688893..2689921 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
OB04_RS13990 (OB04_02745)	yrzS	2689951..2690151 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
OB04_RS13995 (OB04_02746)	ruvB	2690144..2691148 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
OB04_RS14000 (OB04_02747)	ruvA	2691159..2691764 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
OB04_RS14005 (OB04_02748)	bofC	2691903..2692415 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
OB04_RS14010 (OB04_02749)	csbX	2692463..2693770 (-)	1308	WP_003246197.1	MFS transporter	-
OB04_RS14015 (OB04_02750)	iolG	2693841..2694866 (-)	1026	WP_029318179.1	inositol 2-dehydrogenase	-
OB04_RS14020 (OB04_02751)	yrzF	2695104..2695751 (+)	648	WP_038429400.1	phosphotransferase	-
OB04_RS22300 (OB04_02752)	-	2695797..2695919 (-)	123	WP_003229707.1	hypothetical protein	-
OB04_RS22620	-	2696004..2696078 (+)	75	Protein_2742	hypothetical protein	-
OB04_RS22305 (OB04_02753)	-	2696124..2696450 (+)	327	WP_179191255.1	DUF5412 family protein	-
OB04_RS21850	-	2696457..2696597 (+)	141	WP_029727127.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=113767 OB04_RS14000 WP_003229717.1 2691159..2691764(-) (ruvA) [Bacillus subtilis strain SG6]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=113767 OB04_RS14000 WP_003229717.1 2691159..2691764(-) (ruvA) [Bacillus subtilis strain SG6]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408