Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   DQL69_RS01455 Genome accession   NZ_LS483345
Coordinates   265384..266886 (+) Length   500 a.a.
NCBI ID   WP_047235659.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8231     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 260384..271886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL69_RS01440 (NCTC8231_00287) - 260437..261618 (-) 1182 WP_047235657.1 D-alanyl-D-alanine carboxypeptidase family protein -
  DQL69_RS01445 (NCTC8231_00288) pbp3 261786..263018 (-) 1233 WP_111690717.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  DQL69_RS01450 (NCTC8231_00289) amiA 263349..265319 (+) 1971 WP_047235658.1 peptide ABC transporter substrate-binding protein Regulator
  DQL69_RS01455 (NCTC8231_00290) amiC 265384..266886 (+) 1503 WP_047235659.1 ABC transporter permease Regulator
  DQL69_RS01460 (NCTC8231_00291) amiD 266886..267812 (+) 927 WP_002986004.1 oligopeptide ABC transporter permease OppC Regulator
  DQL69_RS01465 (NCTC8231_00292) amiE 267821..268891 (+) 1071 WP_111690718.1 ABC transporter ATP-binding protein Regulator
  DQL69_RS01470 (NCTC8231_00293) amiF 268884..269807 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  DQL69_RS09370 - 269845..269928 (-) 84 Protein_235 IS3 family transposase -
  DQL69_RS09375 - 270062..270372 (-) 311 Protein_236 IS3 family transposase -

Sequence

Protein


Download         Length: 500 a.a.        Molecular weight: 56169.51 Da        Isoelectric Point: 10.2222

>NTDB_id=1137635 DQL69_RS01455 WP_047235659.1 265384..266886(+) (amiC) [Streptococcus pyogenes strain NCTC8231]
MKKYILNRIMRSLVSVVLVTALTYTIVYTLVPTSFIFKQDPNYNKMTTTPDKKVAYENLTFQRMGYVNYFSSKELKDNAS
KVDSSVTTEATSANKAVYEKYIDSLGNGWQLKRFPTSKQFYAIRNIPIYERVWNFFSNLVVIDHPWKIQDKDNPKLARYI
RLEKDKSVGWSLVGSGTKHKYLLYTNGKFPYLHQNFVTLNLGTSYPTYSNIPVLQVISQGQGRTALQDVTFPSGVTKKSS
VDIYSRSYKNPKSLDDITKVNYGKGDSYTKTINNYVDPSMIHNSFVIGFFGVMFSYIVGLPLGLFMARFKNTYFDRFSTA
TMTFMLALPSIAVIYVVRFLGGMVGLPDSFPMLGASDPKSYILPALILGILNIPTTVIWFRRYLVDLQASDWVRFARSKG
LSESEIYRGHLFKNAMVPIVSGVPASIILAIGGATLTETVFAFPGMGKMLIDSIKSANNSMIVGLTFIFTVLSIVSLLLG
DIVMTLVDPRIKLSTKKGGK

Nucleotide


Download         Length: 1503 bp        

>NTDB_id=1137635 DQL69_RS01455 WP_047235659.1 265384..266886(+) (amiC) [Streptococcus pyogenes strain NCTC8231]
ATGAAAAAATACATTTTAAACCGTATCATGCGATCGTTAGTGTCGGTAGTTTTGGTAACGGCTTTAACATACACCATCGT
ATATACTCTAGTACCTACCAGCTTTATCTTTAAACAAGACCCTAATTATAATAAAATGACAACAACACCAGATAAAAAAG
TAGCGTATGAAAATCTAACTTTTCAACGTATGGGTTATGTCAATTATTTTTCAAGCAAAGAATTAAAAGATAATGCTTCT
AAAGTAGATAGTAGTGTAACGACAGAAGCAACTAGTGCTAACAAAGCTGTCTATGAGAAGTATATTGATTCTCTTGGCAA
TGGCTGGCAGCTAAAACGCTTCCCCACTAGCAAACAGTTTTATGCAATTCGCAATATTCCTATTTACGAACGTGTTTGGA
ACTTTTTCTCAAATCTAGTTGTTATTGATCACCCTTGGAAGATTCAGGATAAAGATAATCCAAAATTAGCTAGGTATATT
CGTCTAGAAAAAGATAAATCAGTTGGCTGGTCACTTGTTGGTTCGGGGACAAAACATAAATATCTCCTCTATACTAACGG
AAAATTTCCTTATCTTCACCAAAACTTTGTTACCCTAAACTTAGGAACATCTTATCCAACATACAGCAATATTCCTGTTC
TTCAGGTTATTTCACAAGGGCAAGGACGAACAGCTCTTCAAGATGTGACCTTCCCATCAGGTGTCACTAAGAAATCGTCA
GTGGATATCTATAGCCGTAGCTACAAAAATCCAAAATCATTGGATGATATCACCAAGGTAAACTATGGTAAGGGAGATTC
CTACACTAAAACCATCAATAATTATGTCGACCCATCAATGATTCACAATTCTTTTGTAATTGGTTTTTTTGGTGTTATGT
TTTCCTATATCGTTGGTTTGCCTCTTGGTTTATTTATGGCTCGGTTTAAAAATACCTATTTTGACCGTTTCTCAACAGCG
ACCATGACCTTCATGCTTGCTTTACCAAGTATTGCTGTTATCTATGTTGTTCGCTTCCTAGGTGGCATGGTTGGTTTACC
AGATAGTTTCCCAATGCTGGGGGCATCTGATCCTAAATCTTATATTTTACCAGCCCTTATTTTAGGAATTTTAAATATTC
CAACTACGGTTATCTGGTTCCGTCGCTATCTTGTTGACCTTCAGGCCAGCGATTGGGTACGTTTTGCGCGTTCAAAAGGA
TTATCAGAATCTGAAATTTACAGAGGGCATCTCTTCAAAAATGCCATGGTCCCAATTGTGTCAGGGGTTCCTGCAAGTAT
TATCCTTGCTATTGGTGGTGCAACCTTAACAGAGACTGTCTTTGCCTTCCCGGGTATGGGTAAAATGTTAATTGATTCTA
TTAAATCTGCTAACAATTCTATGATTGTTGGATTAACCTTTATCTTCACTGTCTTGTCAATTGTTTCACTTTTACTAGGA
GATATTGTCATGACCCTTGTCGATCCACGTATTAAATTGTCAACAAAAAAAGGAGGTAAGTAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(299-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

59.2

100

0.592
  amiC Streptococcus thermophilus LMD-9

59.2

100

0.592
  amiC Streptococcus thermophilus LMG 18311

58.8

100

0.588

Multiple sequence alignment