Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DQL21_RS07840 Genome accession   NZ_LS483343
Coordinates   1507195..1508457 (-) Length   420 a.a.
NCBI ID   WP_018030755.1    Uniprot ID   -
Organism   Streptococcus ferus strain NCTC12278     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1502195..1513457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL21_RS07835 (NCTC12278_01567) - 1505314..1507164 (-) 1851 WP_026161977.1 proline--tRNA ligase -
  DQL21_RS07840 (NCTC12278_01568) eeP 1507195..1508457 (-) 1263 WP_018030755.1 RIP metalloprotease RseP Regulator
  DQL21_RS07845 (NCTC12278_01569) - 1508481..1509275 (-) 795 WP_111703021.1 phosphatidate cytidylyltransferase -
  DQL21_RS07850 (NCTC12278_01570) - 1509288..1510037 (-) 750 WP_026161976.1 isoprenyl transferase -
  DQL21_RS07855 (NCTC12278_01571) yajC 1510148..1510492 (-) 345 WP_018030752.1 preprotein translocase subunit YajC -
  DQL21_RS07860 (NCTC12278_01572) traF 1510590..1510934 (-) 345 WP_018030751.1 conjugal transfer protein TraF -
  DQL21_RS07865 (NCTC12278_01573) - 1511031..1511747 (-) 717 WP_018030750.1 YebC/PmpR family DNA-binding transcriptional regulator -
  DQL21_RS07870 (NCTC12278_01574) - 1512102..1512890 (-) 789 WP_018030749.1 hypothetical protein -
  DQL21_RS07875 (NCTC12278_01575) - 1513036..1513446 (-) 411 WP_018030748.1 peptide deformylase -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45720.21 Da        Isoelectric Point: 5.4849

>NTDB_id=1137610 DQL21_RS07840 WP_018030755.1 1507195..1508457(-) (eeP) [Streptococcus ferus strain NCTC12278]
MSGLLTFIIIFGILVVVHEFGHFYFAKKSGILVREFAVGMGPKIFAHTGKDGTAYTIRLLPLGGYVRMAGWGDDDSEIKA
GTPASLTLNSEGVVTRIDLSGKRLDKTSLPMTVVSYDLEDKLEISGTVLDEPKTYSVDHDVTIVEEDGTEVRIAPLDVQY
QNASIWGRLITNFAGPMNNFILGILVFVLAVFIQGGVQNLETNQVRVIPDGAVAKAGLKNNERILQIGDQKVTDWESLSQ
AVDLETKDFDSTETLSLVVQGASGKRTLSVKPQKVQGRYTLGVTPSIESLGVLGNIQAGIRIAWERTFAILNALKNLILQ
PDLNKLGGPVAIYQMSNTAAQQGFLSSLLLMGMLSMNLGILNLIPIPALDGGKILINIIEAIRRKPLKQETETYITLAGV
AIMVILMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1137610 DQL21_RS07840 WP_018030755.1 1507195..1508457(-) (eeP) [Streptococcus ferus strain NCTC12278]
ATGTCAGGACTCTTAACCTTTATCATTATTTTTGGCATTCTTGTTGTGGTTCATGAATTTGGACATTTCTATTTTGCTAA
GAAATCTGGCATCTTAGTCAGAGAATTTGCAGTTGGTATGGGGCCGAAAATTTTTGCACATACAGGGAAAGACGGCACAG
CCTATACGATTAGACTTCTGCCCCTCGGTGGCTATGTCAGAATGGCAGGCTGGGGCGATGATGATTCTGAAATCAAGGCA
GGCACACCTGCTAGTCTGACTCTTAATAGTGAGGGAGTTGTCACTCGTATTGATCTTTCGGGTAAGCGTCTGGATAAAAC
CAGTCTCCCGATGACAGTGGTCTCCTACGACTTAGAAGATAAGTTAGAAATTTCGGGTACCGTTCTGGATGAGCCCAAGA
CCTATTCTGTTGATCACGATGTGACTATTGTTGAGGAAGATGGGACAGAAGTACGTATTGCGCCGCTTGATGTTCAATAC
CAGAATGCAAGTATTTGGGGCCGCCTCATAACCAATTTTGCAGGTCCGATGAATAATTTCATTTTGGGGATTCTAGTTTT
TGTTTTAGCTGTCTTTATCCAAGGTGGGGTGCAAAATCTTGAAACGAATCAGGTTAGGGTTATCCCCGATGGGGCTGTTG
CCAAAGCAGGTCTTAAAAACAACGAACGCATCCTGCAAATCGGAGACCAAAAAGTGACAGACTGGGAGAGTCTATCTCAG
GCTGTCGATCTTGAAACTAAGGATTTTGACTCAACAGAGACGCTCTCTCTTGTGGTCCAAGGAGCATCGGGCAAACGAAC
CCTCTCTGTAAAACCTCAAAAAGTTCAAGGCCGATATACCTTAGGGGTTACCCCGTCAATTGAGTCTCTTGGTGTTCTGG
GCAATATCCAAGCAGGTATCCGAATCGCTTGGGAGAGAACGTTCGCCATCTTAAATGCACTAAAGAATTTGATTTTACAG
CCAGATTTGAATAAATTAGGCGGTCCGGTCGCCATTTACCAGATGAGCAACACCGCCGCGCAGCAAGGTTTTCTGTCAAG
TTTGCTTTTAATGGGAATGCTGTCAATGAACCTAGGGATTTTAAACCTTATTCCCATTCCAGCCCTTGACGGTGGAAAGA
TTCTAATCAATATTATCGAAGCCATCCGTCGGAAACCGCTGAAACAAGAAACAGAAACCTATATTACACTTGCAGGCGTT
GCTATCATGGTCATCTTGATGATTGCGGTGACTTGGAACGATATTATGCGAGCCTTTTTCTAA

Domains


Predicted by InterproScan.

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.796

100

0.66

  eeP Streptococcus thermophilus LMD-9

65.558

100

0.657


Multiple sequence alignment