Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL34_RS06480 Genome accession   NZ_LS483339
Coordinates   1203996..1204805 (-) Length   269 a.a.
NCBI ID   WP_100262465.1    Uniprot ID   A0A0E2Q3G2
Organism   Streptococcus thermophilus strain NCTC12958     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1198996..1209805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL34_RS06455 (NCTC12958_01344) - 1199924..1200310 (-) 387 WP_084828860.1 DUF1934 domain-containing protein -
  DQL34_RS06460 - 1200368..1201282 (-) 915 Protein_1211 GNAT family N-acetyltransferase -
  DQL34_RS06465 (NCTC12958_01346) yidA 1201490..1202299 (+) 810 WP_011226081.1 sugar-phosphatase -
  DQL34_RS06470 (NCTC12958_01347) - 1202301..1203515 (+) 1215 WP_084830670.1 aminoacyltransferase -
  DQL34_RS06475 (NCTC12958_01348) - 1203567..1203919 (-) 353 Protein_1214 YbaN family protein -
  DQL34_RS06480 (NCTC12958_01349) vicX 1203996..1204805 (-) 810 WP_100262465.1 MBL fold metallo-hydrolase Regulator
  DQL34_RS06485 (NCTC12958_01350) vicK 1204814..1206154 (-) 1341 WP_084828862.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL34_RS06490 (NCTC12958_01351) vicR 1206147..1206854 (-) 708 WP_011681206.1 response regulator YycF Regulator
  DQL34_RS06495 (NCTC12958_01352) - 1207381..1208148 (+) 768 WP_011681207.1 amino acid ABC transporter ATP-binding protein -
  DQL34_RS06500 (NCTC12958_01353) - 1208160..1208993 (+) 834 WP_002953142.1 transporter substrate-binding domain-containing protein -
  DQL34_RS06505 (NCTC12958_01354) - 1209011..1209709 (+) 699 WP_014608374.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29955.96 Da        Isoelectric Point: 5.5779

>NTDB_id=1137365 DQL34_RS06480 WP_100262465.1 1203996..1204805(-) (vicX) [Streptococcus thermophilus strain NCTC12958]
MSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGMD
IYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAG
LIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTMEN
QLARADFGVGTDFKIFGTSPDTATPLIDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1137365 DQL34_RS06480 WP_100262465.1 1203996..1204805(-) (vicX) [Streptococcus thermophilus strain NCTC12958]
ATCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGAAAA
GAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTGATC
TTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATATGGCATGGAT
ATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACATAT
TTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCTATTGATCCAC
AATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCTGGT
CTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTGGTC
AACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCGGTA
ATAAAACTAAAAAGATTTATCTGGGTCATCTTTCCAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAAAAT
CAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACTAAT
AGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2Q3G2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment