Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   DQL44_RS02350 Genome accession   NZ_LS483335
Coordinates   429087..430439 (+) Length   450 a.a.
NCBI ID   WP_111677108.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8332     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 424087..435439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL44_RS02325 (NCTC8332_00454) - 424242..424811 (+) 570 WP_111677104.1 hypothetical protein -
  DQL44_RS02330 (NCTC8332_00455) - 424780..425928 (+) 1149 WP_111677105.1 acetyl-CoA C-acyltransferase -
  DQL44_RS02335 (NCTC8332_00456) - 425885..427132 (+) 1248 WP_111677106.1 AMP-binding protein -
  DQL44_RS02340 (NCTC8332_00457) - 427188..428222 (+) 1035 WP_172448831.1 DUF3114 domain-containing protein -
  DQL44_RS02345 (NCTC8332_00458) vicR 428384..429094 (+) 711 WP_002985645.1 response regulator YycF Regulator
  DQL44_RS02350 (NCTC8332_00459) vicK 429087..430439 (+) 1353 WP_111677108.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL44_RS02355 (NCTC8332_00460) vicX 430443..431252 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQL44_RS02360 (NCTC8332_00461) rnc 431683..432375 (+) 693 WP_002985639.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51347.77 Da        Isoelectric Point: 5.4026

>NTDB_id=1137131 DQL44_RS02350 WP_111677108.1 429087..430439(+) (vicK) [Streptococcus pyogenes strain NCTC8332]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINEAARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWLEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKTDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFVWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDVD

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=1137131 DQL44_RS02350 WP_111677108.1 429087..430439(+) (vicK) [Streptococcus pyogenes strain NCTC8332]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGATTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATCCGAGACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTGTCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAGGCAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACCTATCGTGATTTGGTATCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGCTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGCTTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGGTACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGCTTGAAATTGATAATGATAAAATGACACAGGTTATCGAGAATATTTTGAACAATGCCATTAAGTATTCTCCAGA
TGGTGGAAAAATTACAGTCCGTATGAAAACAACAGATACCCAATTAATTATTTCCATTTCAGACCAAGGACTAGGTATCC
CTAAAACAGATTTGCCTCTTATTTTTGATCGGTTCTATCGTGTAGACAAGGCAAGAAGTCGTGCCCAAGGAGGGACCGGT
CTAGGCCTTGCCATTGCTAAAGAAATCATCAAGCAGCACCATGGCTTTGTCTGGGCTAAGAGTGACTATGGTAAAGGATC
GACCTTTACTATTGTCTTGCCTTATGAAAAAGATGCAGCCATCTATGAAGAATGGGAGGAAGATGTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.464

92

0.667

  micB Streptococcus pneumoniae Cp1015

67.294

94.444

0.636


Multiple sequence alignment