Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   DQL28_RS07030 Genome accession   NZ_LS483334
Coordinates   1392619..1393971 (-) Length   450 a.a.
NCBI ID   WP_111676637.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12050     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1387619..1398971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL28_RS07020 (NCTC12050_01397) rnc 1390671..1391363 (-) 693 WP_002990670.1 ribonuclease III -
  DQL28_RS07025 (NCTC12050_01398) vicX 1391806..1392615 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQL28_RS07030 (NCTC12050_01399) vicK 1392619..1393971 (-) 1353 WP_111676637.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL28_RS07035 (NCTC12050_01400) vicR 1393964..1394674 (-) 711 WP_002985645.1 response regulator YycF Regulator
  DQL28_RS07040 (NCTC12050_01401) - 1394836..1395870 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQL28_RS07045 (NCTC12050_01402) - 1395926..1397173 (-) 1248 WP_002995606.1 AMP-binding protein -
  DQL28_RS07050 (NCTC12050_01403) - 1397130..1398278 (-) 1149 WP_111676640.1 acetyl-CoA C-acyltransferase -
  DQL28_RS07055 (NCTC12050_01404) - 1398247..1398816 (-) 570 WP_111676642.1 hypothetical protein -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51433.90 Da        Isoelectric Point: 5.4026

>NTDB_id=1137091 DQL28_RS07030 WP_111676637.1 1392619..1393971(-) (vicK) [Streptococcus pyogenes strain NCTC12050]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTVTGKVYEIVRDYPITS
VWLEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKTDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDVD

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=1137091 DQL28_RS07030 WP_111676637.1 1392619..1393971(-) (vicK) [Streptococcus pyogenes strain NCTC12050]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGACTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATTCGAGACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTGTCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAGACAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACCTACCGTGATTTGGTATCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGTTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGCTTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGTTACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGCTTGAAATTGATAATGATAAAATGACACAGGTTATCGAGAATATTTTGAACAATGCCATTAAGTATTCTCCAGA
TGGTGGAAAAATTACAGTCCGTATGAAAACAACAGATACCCAATTAATTATTTCCATTTCAGACCAAGGACTAGGTATCC
CTAAAACAGATTTGCCTCTTATTTTTGATCGGTTCTATCGTGTAGACAAGGCAAGAAGTCGTGCCCAAGGAGGGACCGGT
CTAGGCCTTGCCATTGCTAAAGAAATCATCAAGCAGCACCATGGCTTTATCTGGGCTAAGAGTGACTATGGTAAAGGATC
GACCTTTACTATTGTCTTGCCTTATGAAAAAGATGCAGCCATCTATGAAGAATGGGAGGAAGATGTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.705

92

0.669

  micB Streptococcus pneumoniae Cp1015

67.765

94.444

0.64


Multiple sequence alignment