Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   DQL47_RS07430 Genome accession   NZ_LS483328
Coordinates   1550826..1551827 (-) Length   333 a.a.
NCBI ID   WP_012677612.1    Uniprot ID   A0A6M1KZY1
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC12090     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1545826..1556827
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL47_RS07415 (NCTC12090_01500) - 1546663..1547997 (-) 1335 WP_043026197.1 glycosyltransferase family 4 protein -
  DQL47_RS07420 (NCTC12090_01501) - 1547999..1548997 (-) 999 WP_111690293.1 glycosyltransferase family 4 protein -
  DQL47_RS07425 (NCTC12090_01502) - 1549281..1550756 (-) 1476 WP_111690294.1 alpha-amylase -
  DQL47_RS07430 (NCTC12090_01503) ccpA 1550826..1551827 (-) 1002 WP_012677612.1 catabolite control protein A Regulator
  DQL47_RS07435 (NCTC12090_01504) - 1552001..1553086 (+) 1086 WP_012679860.1 M24 family metallopeptidase -
  DQL47_RS07440 (NCTC12090_01505) - 1553453..1554121 (+) 669 WP_111690295.1 NAD(P)H-dependent oxidoreductase -
  DQL47_RS07445 (NCTC12090_01506) - 1554236..1555162 (+) 927 WP_111690573.1 glycosyltransferase family 2 protein -
  DQL47_RS07455 (NCTC12090_01507) smpB 1555446..1555913 (-) 468 WP_043984178.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36617.72 Da        Isoelectric Point: 5.7618

>NTDB_id=1136752 DQL47_RS07430 WP_012677612.1 1550826..1551827(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFDLAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1136752 DQL47_RS07430 WP_012677612.1 1550826..1551827(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATCCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATTGTTCTTGCTTCAAGCGATGAGGACGACGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGTGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGATTTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGCAAGCGTGTTCC
AGAGGACTTTGAGATTATTACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGTCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6M1KZY1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

76.877

100

0.769

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547


Multiple sequence alignment