Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQL47_RS00785 | Genome accession | NZ_LS483328 |
| Coordinates | 133262..134215 (+) | Length | 317 a.a. |
| NCBI ID | WP_021320264.1 | Uniprot ID | A0AAW3GQ61 |
| Organism | Streptococcus equi subsp. zooepidemicus strain NCTC12090 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 128262..139215
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL47_RS00745 (NCTC12090_00149) | - | 128735..129403 (+) | 669 | WP_111689763.1 | ATP-binding cassette domain-containing protein | - |
| DQL47_RS00750 (NCTC12090_00150) | comGA/cglA | 129560..130498 (+) | 939 | WP_111689764.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL47_RS00755 (NCTC12090_00151) | comYB | 130431..131465 (+) | 1035 | WP_228274515.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL47_RS00760 (NCTC12090_00152) | comGC/cglC | 131466..131789 (+) | 324 | WP_111689766.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL47_RS00765 (NCTC12090_00153) | comGD | 131767..132192 (+) | 426 | WP_111689767.1 | competence type IV pilus minor pilin ComGD | - |
| DQL47_RS00770 | comGE | 132197..132439 (+) | 243 | WP_207622334.1 | competence type IV pilus minor pilin ComGE | - |
| DQL47_RS00775 (NCTC12090_00154) | comYF | 132426..132860 (+) | 435 | WP_012677237.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL47_RS00780 (NCTC12090_00155) | comGG | 132838..133200 (+) | 363 | WP_037580629.1 | competence type IV pilus minor pilin ComGG | - |
| DQL47_RS00785 (NCTC12090_00156) | comYH | 133262..134215 (+) | 954 | WP_021320264.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQL47_RS00790 (NCTC12090_00157) | - | 134275..135474 (+) | 1200 | WP_021320265.1 | acetate kinase | - |
| DQL47_RS00795 (NCTC12090_00158) | - | 135846..136460 (-) | 615 | WP_111689769.1 | hypothetical protein | - |
| DQL47_RS00800 (NCTC12090_00159) | - | 136990..139032 (+) | 2043 | WP_111689770.1 | BglG family transcription antiterminator | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35754.78 Da Isoelectric Point: 4.6973
>NTDB_id=1136722 DQL47_RS00785 WP_021320264.1 133262..134215(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAQTILNHSHKSIDYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFVIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAQTILNHSHKSIDYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFVIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
Nucleotide
Download Length: 954 bp
>NTDB_id=1136722 DQL47_RS00785 WP_021320264.1 133262..134215(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain NCTC12090]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGCTAACCAAGGAGGAGTGGCGTCAGGCTTACCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGTTTTATCATGCTTTATATTTTGGAGACCTTGAGTTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGAACAGGTAATTTAGCTCAAACTATTTTAAACCACTCACATAAGA
GCATTGATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCAGCTAGTATTGCTGAAATCATGGGGTCGTCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAGGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAACAGGCCTTAAAGTACCTGAAAAAAGATGGTTTTGTTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGCAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGCCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGCTAACCAAGGAGGAGTGGCGTCAGGCTTACCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGTTTTATCATGCTTTATATTTTGGAGACCTTGAGTTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGAACAGGTAATTTAGCTCAAACTATTTTAAACCACTCACATAAGA
GCATTGATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCAGCTAGTATTGCTGAAATCATGGGGTCGTCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAGGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAACAGGCCTTAAAGTACCTGAAAAAAGATGGTTTTGTTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGCAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
63.291 |
99.685 |
0.631 |
| comYH | Streptococcus mutans UA140 |
63.291 |
99.685 |
0.631 |