Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   DQL07_RS02370 Genome accession   NZ_LS483327
Coordinates   428715..430067 (+) Length   450 a.a.
NCBI ID   WP_111702817.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12069     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 423715..435067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL07_RS02345 - 423865..424014 (+) 150 WP_002994198.1 hypothetical protein -
  DQL07_RS02350 - 424409..425556 (+) 1148 Protein_400 acetyl-CoA C-acyltransferase -
  DQL07_RS02355 (NCTC12069_00460) - 425513..426760 (+) 1248 WP_002995606.1 AMP-binding protein -
  DQL07_RS02360 (NCTC12069_00461) - 426816..427850 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQL07_RS02365 (NCTC12069_00462) vicR 428012..428722 (+) 711 WP_002985645.1 response regulator YycF Regulator
  DQL07_RS02370 (NCTC12069_00463) vicK 428715..430067 (+) 1353 WP_111702817.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL07_RS02375 (NCTC12069_00464) vicX 430071..430880 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQL07_RS02380 (NCTC12069_00465) rnc 431323..432015 (+) 693 WP_021733153.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51453.93 Da        Isoelectric Point: 5.5556

>NTDB_id=1136684 DQL07_RS02370 WP_111702817.1 428715..430067(+) (vicK) [Streptococcus pyogenes strain NCTC12069]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRYLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWIEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKTDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDLD

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=1136684 DQL07_RS02370 WP_111702817.1 428715..430067(+) (vicK) [Streptococcus pyogenes strain NCTC12069]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGATTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATCCGATACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTGTCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAAACAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACCTACCGTGATTTGGTATCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGCTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGCTTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGGTACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGATTGAAATTGATAATGATAAAATGACACAGGTTATCGAGAATATTTTGAACAATGCCATTAAGTATTCTCCAGA
TGGTGGAAAAATCACAGTCCGTATGAAAACAACAGATACCCAATTAATTATTTCCATTTCAGACCAAGGACTAGGTATCC
CTAAAACAGATTTGCCTCTTATTTTTGATCGGTTCTATCGTGTAGACAAGGCAAGAAGTCGTGCCCAAGGAGGGACCGGT
CTAGGCCTTGCCATTGCTAAAGAAATCATCAAGCAGCACCATGGCTTTATCTGGGCTAAGAGTGACTATGGTAAAGGATC
GACCTTTACTATTGTCTTGCCTTATGAAAAAGATGCAGCCATCTATGAAGAATGGGAGGAAGATTTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.947

92

0.671

  micB Streptococcus pneumoniae Cp1015

67.529

94.444

0.638


Multiple sequence alignment