Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DQL07_RS02375 Genome accession   NZ_LS483327
Coordinates   430071..430880 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12069     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 425071..435880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL07_RS02355 (NCTC12069_00460) - 425513..426760 (+) 1248 WP_002995606.1 AMP-binding protein -
  DQL07_RS02360 (NCTC12069_00461) - 426816..427850 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  DQL07_RS02365 (NCTC12069_00462) vicR 428012..428722 (+) 711 WP_002985645.1 response regulator YycF Regulator
  DQL07_RS02370 (NCTC12069_00463) vicK 428715..430067 (+) 1353 WP_111702817.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DQL07_RS02375 (NCTC12069_00464) vicX 430071..430880 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  DQL07_RS02380 (NCTC12069_00465) rnc 431323..432015 (+) 693 WP_021733153.1 ribonuclease III -
  DQL07_RS02385 (NCTC12069_00466) smc 432016..435555 (+) 3540 WP_021733163.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=1136685 DQL07_RS02375 WP_002985641.1 430071..430880(+) (vicX) [Streptococcus pyogenes strain NCTC12069]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1136685 DQL07_RS02375 WP_002985641.1 430071..430880(+) (vicX) [Streptococcus pyogenes strain NCTC12069]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment