Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   DQL35_RS07325 Genome accession   NZ_LS483325
Coordinates   1521637..1522638 (-) Length   333 a.a.
NCBI ID   WP_012516008.1    Uniprot ID   A1E373
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC7022     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1516637..1527638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL35_RS07310 (NCTC7022_01476) - 1517461..1518795 (-) 1335 WP_111678251.1 glycosyltransferase family 4 protein -
  DQL35_RS07315 (NCTC7022_01477) - 1518797..1519795 (-) 999 WP_111678252.1 glycosyltransferase family 4 protein -
  DQL35_RS07320 (NCTC7022_01478) - 1520092..1521567 (-) 1476 WP_111678253.1 alpha-amylase -
  DQL35_RS07325 (NCTC7022_01479) ccpA 1521637..1522638 (-) 1002 WP_012516008.1 catabolite control protein A Regulator
  DQL35_RS07330 (NCTC7022_01480) - 1522812..1523897 (+) 1086 WP_111678254.1 aminopeptidase P family protein -
  DQL35_RS07335 (NCTC7022_01481) - 1524255..1524923 (+) 669 WP_111678255.1 NAD(P)H-dependent oxidoreductase -
  DQL35_RS07340 (NCTC7022_01482) - 1525038..1525964 (+) 927 WP_111678847.1 glycosyltransferase family 2 protein -
  DQL35_RS10580 - 1525948..1526136 (-) 189 WP_138119593.1 hypothetical protein -
  DQL35_RS07345 (NCTC7022_01483) smpB 1526251..1526718 (-) 468 WP_012677607.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36631.75 Da        Isoelectric Point: 5.7642

>NTDB_id=1136581 DQL35_RS07325 WP_012516008.1 1521637..1522638(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1136581 DQL35_RS07325 WP_012516008.1 1521637..1522638(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain NCTC7022]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTCGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATTCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATTGTTCTTGCTTCAAGTGATGAGGACGATGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTCGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGGGCAGAGTTTTCTCGTTCGCGTACGCCAATCGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGATATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTTATTGATGATATCAATGGAAAGGTGCGTTTAGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGAGCTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGTAAGCGTGTTCC
AGAGGACTTTGAGATTATCACAAGCAATGATTCTCCAGTGGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGCCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A1E373

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

76.877

100

0.769

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547


Multiple sequence alignment