Detailed information NTG0113573

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: D934_RS01270
• Genome accession: NZ_CP006696
• Coordinates: 318162..319205 (+)
• Length: 347 a.a.
• NCBI ID: WP_024748974.1
• Uniprot ID: A0A060H7E3
• Organism: Xylella fastidiosa subsp. sandyi Ann-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 313162..324205

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D934_RS01255 (D934_01415)	-	313792..314820 (-)	1029	WP_020851805.1	right-handed parallel beta-helix repeat-containing protein	-
D934_RS01260 (D934_01420)	-	315841..316872 (+)	1032	WP_024748973.1	nitronate monooxygenase family protein	-
D934_RS01265 (D934_01430)	lexA	317345..317980 (+)	636	WP_020852082.1	transcriptional repressor LexA	-
D934_RS01270 (D934_01435)	recA	318162..319205 (+)	1044	WP_024748974.1	recombinase RecA	Machinery gene
D934_RS01275 (D934_01440)	alaS	319693..322347 (+)	2655	WP_042836357.1	alanine--tRNA ligase	-
D934_RS01280 (D934_01445)	csrA	322486..322701 (+)	216	WP_004085529.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37594.29 Da
• Isoelectric Point: 5.0879

>NTDB_id=113573 D934_RS01270 WP_024748974.1 318162..319205(+) (recA) [Xylella fastidiosa subsp. sandyi Ann-1]
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
QCQKKGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSIDIMVIDSVAALTPRAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGIMMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIGQGKDNARGYLRENPHLAAKL
EADLREKFEPTELSREEGDEDTLEDAM

Nucleotide

• Length: 1044 bp

>NTDB_id=113573 D934_RS01270 WP_024748974.1 318162..319205(+) (recA) [Xylella fastidiosa subsp. sandyi Ann-1]
ATGGATGAGAACAAGAAACGCGCCCTTTCTGTCGCTTTAAGCCAGATTGAAAAACAGTTCGGCAAGGGGTCCGTGATGCG
GATGGGCGATCGCGTGATCGAAGCCGTAGAGGCGATCCCGACAGGTTCGCTCATGTTGGATCTGGCCCTGGGGATAGGTG
GTTTGCCAAAGGGACGTGTCGTGGAAATCTATGGGCCGGAATCTTCTGGGAAGACCACATTGACTTTGCAGGCGATCGCT
CAATGCCAGAAGAAGGGAGGTACAGCAGCGTTCATTGATGCTGAGCATGCCTTGGATCCGATTTATGCGGGCAAGTTAGG
CGTCAATGTTGATGATTTGTTGTTGTCTCAGCCAGATACTGGGGAGCAGGCTCTGGAAATCGCTGACATGCTGGTGCGCT
CGGGGTCGATCGATATCATGGTTATTGATTCGGTTGCGGCACTCACGCCAAGGGCGGAGATTGAGGGTGAGATGGGAGAT
CAGTTGCCCGGTCTTCAGGCGCGATTGATGAGCCAGGCGCTGCGTAAATTGACCGGCAATATCAAGCGCTCTAATACGCT
GGTGATTTTTATCAACCAGTTGCGTATGAAAATTGGGATCATGATGCCGGGTCAAAGCCCTGAAACTACGACAGGGGGTA
ATGCGCTGAAGTTCTATGCTTCAGTGCGTTTGGATATTCGCCGTATTGGCGCGATCAAGAAAGGTGACGAAATTATCGGG
AATCAAACCAAAATCAAGGTTGTTAAAAACAAGTTGGCGCCTCCCTTCAAACAAGTCGTGACTGAGATTCTCTATGGTGA
AGGCATCAGTCGTGAAGGGGAATTGATTGAAATGGGCGTGGAGGCCAAGTTGGTTGAGAAAGCCGGCGCTTGGTATAGCT
ATGGTGGTGAGCGGATCGGGCAAGGAAAAGATAATGCGCGTGGCTATCTACGCGAAAACCCGCATCTTGCGGCCAAGCTT
GAGGCTGATTTGCGTGAGAAATTTGAGCCGACCGAGCTTTCTCGAGAAGAGGGCGATGAAGATACGCTCGAAGATGCAAT
GTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

3D structure

• AlphaFold DB: A0A060H7E3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	73.03	95.101	0.695
recA	Acinetobacter baylyi ADP1	72.561	94.524	0.686
recA	Acinetobacter baumannii D1279779	71.601	95.389	0.683
recA	Pseudomonas stutzeri DSM 10701	71.646	94.524	0.677
recA	Vibrio cholerae strain A1552	70.245	93.948	0.66
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.245	93.948	0.66
recA	Neisseria gonorrhoeae MS11	66.082	98.559	0.651
recA	Neisseria gonorrhoeae MS11	66.082	98.559	0.651
recA	Neisseria gonorrhoeae strain FA1090	66.082	98.559	0.651
recA	Glaesserella parasuis strain SC1401	68.111	93.084	0.634
recA	Helicobacter pylori strain NCTC11637	61.747	95.677	0.591
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.078	96.254	0.588
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.438	92.219	0.585
recA	Helicobacter pylori 26695	61.145	95.677	0.585
recA	Latilactobacillus sakei subsp. sakei 23K	59.184	98.847	0.585
recA	Bacillus subtilis subsp. subtilis str. 168	61.538	93.66	0.576
recA	Streptococcus pneumoniae D39	60.366	94.524	0.571
recA	Streptococcus pneumoniae Rx1	60.366	94.524	0.571
recA	Streptococcus pneumoniae R6	60.366	94.524	0.571
recA	Streptococcus pneumoniae TIGR4	60.366	94.524	0.571
recA	Streptococcus mutans UA159	60	95.101	0.571
recA	Streptococcus pyogenes NZ131	59.697	95.101	0.568
recA	Streptococcus mitis SK321	59.756	94.524	0.565
recA	Streptococcus mitis NCTC 12261	59.451	94.524	0.562
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.202	93.948	0.556
recA	Lactococcus lactis subsp. cremoris KW2	58.154	93.66	0.545