Detailed information NTG0113318

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: M949_RS07190
• Genome accession: NZ_CP006649
• Coordinates: 1550311..1551414 (+)
• Length: 367 a.a.
• NCBI ID: WP_014938005.1
• Uniprot ID: J9R5B4
• Organism: Riemerella anatipestifer CH3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1545311..1556414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M949_RS07170 (M949_1511)	-	1545562..1548492 (-)	2931	WP_038693793.1	SusC/RagA family TonB-linked outer membrane protein	-
M949_RS07175 (M949_1512)	-	1548840..1549313 (+)	474	WP_038693795.1	Lrp/AsnC family transcriptional regulator	-
M949_RS07180 (M949_1513)	ruvC	1549366..1549920 (+)	555	WP_014938003.1	crossover junction endodeoxyribonuclease RuvC	-
M949_RS07185 (M949_1514)	-	1549931..1550308 (+)	378	WP_014938004.1	group III truncated hemoglobin	-
M949_RS07190 (M949_1515)	dprA	1550311..1551414 (+)	1104	WP_014938005.1	DNA-processing protein DprA	Machinery gene
M949_RS07195 (M949_1516)	gdhA	1551598..1552956 (+)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
M949_RS07200 (M949_1517)	-	1553088..1553738 (+)	651	WP_014938007.1	HD domain-containing protein	-
M949_RS07205 (M949_1518)	-	1553790..1554341 (+)	552	WP_014938008.1	hypothetical protein	-
M949_RS07215 (M949_1519)	comF	1554568..1555221 (+)	654	WP_038693798.1	ComF family protein	Machinery gene

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40200.07 Da
• Isoelectric Point: 6.6101

>NTDB_id=113318 M949_RS07190 WP_014938005.1 1550311..1551414(+) (dprA) [Riemerella anatipestifer CH3]
MVNAEEILYSIALRRSPLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIVYPSKHKILAEEILSNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPLVDVALTPVQKPIYDA
IKGGNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRKYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=113318 M949_RS07190 WP_014938005.1 1550311..1551414(+) (dprA) [Riemerella anatipestifer CH3]
ATGGTAAATGCAGAAGAAATTTTATATTCTATTGCTTTACGGCGAAGCCCTTTGGTGGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTAAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATACCGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGGTTGGCACTAGGTACAGACGGGATAGCTCAT
CAAGAGGCTTTAAAAAATAACATAAAAACTTCAGCAGTTTTAGCACATGGTTTACATATTGTTTATCCGTCTAAACATAA
AATTCTTGCTGAAGAAATATTAAGTAATGGAGGAGCTTTGTTCTCTGAATTCTGCTCTGATGAAAAACCAGATAGAGAAC
ATTTTTTGCAAAGGAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCTGGCGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTCTTGCGGGGCGTCTTACTGATAAGTATAGCCA
AGGCTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTTAGTTGATGTCGCTTTAACTCCTGTTCAAAAACCTATTTATGATGCT
ATTAAAGGAGGTAATGATATTTCTTTAGATGACTTGTCAGAAAAATTAAATCAACCCATTTCTAAAGTGTTTCCAGTTTT
GTTAGAATTAGAATTATTGGGGTTGATAAGAGCAAATTCTGGGAGGAAATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (309-361)

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

3D structure

• AlphaFold DB: J9R5B4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	92.916	100	0.929