Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | NMG85_RS17855 | Genome accession | NZ_LR882950 |
| Coordinates | 3878598..3878960 (+) | Length | 120 a.a. |
| NCBI ID | WP_026795306.1 | Uniprot ID | A0A1J1JB94 |
| Organism | Planktothrix agardhii strain PCC7805 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3873598..3883960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMG85_RS17830 (PCC7805_03579) | - | 3874213..3875070 (+) | 858 | WP_042154602.1 | transporter substrate-binding domain-containing protein | - |
| NMG85_RS17835 | - | 3875200..3875346 (+) | 147 | WP_158442898.1 | hypothetical protein | - |
| NMG85_RS17840 (PCC7805_03580) | - | 3875348..3875914 (+) | 567 | WP_026788060.1 | sugar O-acetyltransferase | - |
| NMG85_RS17845 (PCC7805_03581) | - | 3876021..3876716 (-) | 696 | WP_026795304.1 | GDSL-type esterase/lipase family protein | - |
| NMG85_RS17850 (PCC7805_03582) | - | 3877074..3878309 (+) | 1236 | WP_026796691.1 | response regulator | - |
| NMG85_RS17855 (PCC7805_03583) | pilH | 3878598..3878960 (+) | 363 | WP_026795306.1 | response regulator | Machinery gene |
| NMG85_RS17860 (PCC7805_03584) | - | 3878977..3879501 (+) | 525 | WP_026788064.1 | chemotaxis protein CheW | - |
| NMG85_RS17865 (PCC7805_03585) | - | 3879790..3883221 (+) | 3432 | WP_227381515.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13523.75 Da Isoelectric Point: 4.7293
>NTDB_id=1132919 NMG85_RS17855 WP_026795306.1 3878598..3878960(+) (pilH) [Planktothrix agardhii strain PCC7805]
MNTVMVVEDSVTQREMICGLLKENGLQVSIATDGVEALEEVQKNPPDLMVLDIVMPRMNGYELCRRLKSDPKTRDIAIVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPSELIGTVKQLLR
MNTVMVVEDSVTQREMICGLLKENGLQVSIATDGVEALEEVQKNPPDLMVLDIVMPRMNGYELCRRLKSDPKTRDIAIVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPSELIGTVKQLLR
Nucleotide
Download Length: 363 bp
>NTDB_id=1132919 NMG85_RS17855 WP_026795306.1 3878598..3878960(+) (pilH) [Planktothrix agardhii strain PCC7805]
ATGAATACAGTTATGGTTGTCGAAGATAGTGTCACTCAACGGGAGATGATTTGTGGTCTTCTCAAGGAAAATGGGTTACA
AGTCAGTATCGCCACCGACGGTGTGGAAGCACTTGAAGAAGTGCAAAAAAACCCCCCCGATTTAATGGTGCTAGATATTG
TTATGCCCAGGATGAACGGCTATGAACTCTGTCGTCGCCTAAAATCCGATCCCAAAACCCGAGATATTGCCATTGTCATG
TGTTCTTCTAAGGGGGAAGAATTTGACCGCTATTGGGGGATGAAACAGGGGGCAGATGCTTATATTGCTAAACCCTTTCA
ACCCAGTGAACTCATCGGAACCGTTAAACAGTTACTTAGATAA
ATGAATACAGTTATGGTTGTCGAAGATAGTGTCACTCAACGGGAGATGATTTGTGGTCTTCTCAAGGAAAATGGGTTACA
AGTCAGTATCGCCACCGACGGTGTGGAAGCACTTGAAGAAGTGCAAAAAAACCCCCCCGATTTAATGGTGCTAGATATTG
TTATGCCCAGGATGAACGGCTATGAACTCTGTCGTCGCCTAAAATCCGATCCCAAAACCCGAGATATTGCCATTGTCATG
TGTTCTTCTAAGGGGGAAGAATTTGACCGCTATTGGGGGATGAAACAGGGGGCAGATGCTTATATTGCTAAACCCTTTCA
ACCCAGTGAACTCATCGGAACCGTTAAACAGTTACTTAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
74.167 |
100 |
0.742 |
| chpA | Acinetobacter baumannii strain A118 |
38.793 |
96.667 |
0.375 |
| pilG | Acinetobacter baumannii strain A118 |
38.596 |
95 |
0.367 |