Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | H1W81_RS02090 | Genome accession | NZ_LR824002 |
| Coordinates | 382803..383759 (+) | Length | 318 a.a. |
| NCBI ID | WP_011226622.1 | Uniprot ID | A0A8D6XRE9 |
| Organism | Streptococcus thermophilus isolate STH_CIRM_67 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 377803..388759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1W81_RS02050 (STHERMO_0422) | - | 378700..379062 (+) | 363 | WP_011226630.1 | DUF1033 family protein | - |
| H1W81_RS02055 (STHERMO_0423) | comGA/cglA/cilD | 379143..380084 (+) | 942 | WP_180484814.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| H1W81_RS02060 (STHERMO_0424) | comYB | 379966..381066 (+) | 1101 | WP_375708571.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| H1W81_RS02065 (STHERMO_0425) | comYC | 381063..381389 (+) | 327 | WP_002946126.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| H1W81_RS02070 (STHERMO_0426) | comYD | 381349..381777 (+) | 429 | WP_011226626.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| H1W81_RS02075 (STHERMO_0427) | comGE | 381749..382042 (+) | 294 | WP_011226625.1 | competence type IV pilus minor pilin ComGE | - |
| H1W81_RS02080 (STHERMO_0428) | comYF | 382026..382463 (+) | 438 | WP_014608742.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| H1W81_RS02085 (STHERMO_0429) | comGG | 382441..382758 (+) | 318 | WP_011226623.1 | competence type IV pilus minor pilin ComGG | - |
| H1W81_RS02090 (STHERMO_0430) | comYH | 382803..383759 (+) | 957 | WP_011226622.1 | class I SAM-dependent methyltransferase | Machinery gene |
| H1W81_RS02095 (STHERMO_0431) | - | 383815..385008 (+) | 1194 | WP_022096898.1 | acetate kinase | - |
| H1W81_RS02100 (STHERMO_0432) | - | 385257..385454 (+) | 198 | WP_011681682.1 | helix-turn-helix transcriptional regulator | - |
| H1W81_RS09365 (STHERMO_0434) | - | 385697..386122 (+) | 426 | WP_041827107.1 | CPBP family intramembrane glutamic endopeptidase | - |
| H1W81_RS02110 (STHERMO_0435) | - | 386196..386644 (+) | 449 | Protein_360 | CAAX protease | - |
| H1W81_RS02115 (STHERMO_0437) | - | 386747..387409 (+) | 663 | WP_179971686.1 | CPBP family intramembrane glutamic endopeptidase | - |
| H1W81_RS02120 (STHERMO_0438) | proC | 387439..388209 (-) | 771 | WP_011226616.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35857.00 Da Isoelectric Point: 4.7123
>NTDB_id=1132321 H1W81_RS02090 WP_011226622.1 382803..383759(+) (comYH) [Streptococcus thermophilus isolate STH_CIRM_67]
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANELIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTQEKQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIAEVVNSV
AVYIQGDAVRPHILKESNVIISDLPIGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAIFLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTKNAPETFVYPLSDLQNPRILKDFTENFQKWKSDNSIF
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANELIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTQEKQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIAEVVNSV
AVYIQGDAVRPHILKESNVIISDLPIGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAIFLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTKNAPETFVYPLSDLQNPRILKDFTENFQKWKSDNSIF
Nucleotide
Download Length: 957 bp
>NTDB_id=1132321 H1W81_RS02090 WP_011226622.1 382803..383759(+) (comYH) [Streptococcus thermophilus isolate STH_CIRM_67]
ATGAATTTTGAAGCAATTGAGACAGCTTTTGAGCTGTTGTTAGAAAATGTCCAAACTATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCACTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTTGCTAATGAGCTCATCATCAAAAACAACG
AGAAATTACGGGCGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTTTTGTTTATCAAACTAGGGCAATTG
GAAGCTTTACAAGCCAATCACCAATTTACACCAGATGCTATCGGATTTATCATTCTGTACTTGCTCGAAGGTTTGACCCA
GGAAAAACAATTAGATATCTTGGAGATTGGTTCGGGAACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGGATGGAAGTTGATGATCTTCTTATCGATTTGTCAGCTAGTATTGCTGAGGTGGTGAATTCAGTA
GCGGTTTATATCCAAGGGGATGCTGTTCGACCACATATTCTCAAAGAGAGCAACGTTATTATCAGCGATTTACCTATAGG
TTACTACCCTAATGATGAGATTGCGAGTCGTTTCAAGGTGGCAGCAACTGGCGAACACACTTATGCCCATCATCTTCTTA
TGGAGCAATCGCTTAAGTATTTGAAGAAAGATGGTATTGCTATTTTTTTGGCACCAACCAATCTTTTGACAAGCCCTCAA
AGTGATCTGCTTAAGAAGTGGTTATCAGGATATGCTGATATTATTGCTGTTATTACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAACATGAAGTCTATCTTTGTGCTAAAAAAACAAACTAAAAATGCTCCTGAGACCTTCGTTTACCCACTTAGCG
ATTTGCAAAATCCAAGGATCCTCAAGGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
ATGAATTTTGAAGCAATTGAGACAGCTTTTGAGCTGTTGTTAGAAAATGTCCAAACTATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCACTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTTGCTAATGAGCTCATCATCAAAAACAACG
AGAAATTACGGGCGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTTTTGTTTATCAAACTAGGGCAATTG
GAAGCTTTACAAGCCAATCACCAATTTACACCAGATGCTATCGGATTTATCATTCTGTACTTGCTCGAAGGTTTGACCCA
GGAAAAACAATTAGATATCTTGGAGATTGGTTCGGGAACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGGATGGAAGTTGATGATCTTCTTATCGATTTGTCAGCTAGTATTGCTGAGGTGGTGAATTCAGTA
GCGGTTTATATCCAAGGGGATGCTGTTCGACCACATATTCTCAAAGAGAGCAACGTTATTATCAGCGATTTACCTATAGG
TTACTACCCTAATGATGAGATTGCGAGTCGTTTCAAGGTGGCAGCAACTGGCGAACACACTTATGCCCATCATCTTCTTA
TGGAGCAATCGCTTAAGTATTTGAAGAAAGATGGTATTGCTATTTTTTTGGCACCAACCAATCTTTTGACAAGCCCTCAA
AGTGATCTGCTTAAGAAGTGGTTATCAGGATATGCTGATATTATTGCTGTTATTACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAACATGAAGTCTATCTTTGTGCTAAAAAAACAAACTAAAAATGCTCCTGAGACCTTCGTTTACCCACTTAGCG
ATTTGCAAAATCCAAGGATCCTCAAGGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
68.889 |
99.057 |
0.682 |
| comYH | Streptococcus mutans UA140 |
68.889 |
99.057 |
0.682 |