Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   H0511_RS02310 Genome accession   NZ_LR822017
Coordinates   428535..428978 (+) Length   147 a.a.
NCBI ID   WP_179972686.1    Uniprot ID   A0A7U7H0S3
Organism   Streptococcus thermophilus isolate STH_CIRM_336     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 423535..433978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0511_RS02290 - 423978..424739 (-) 762 Protein_400 NUDIX domain-containing protein -
  H0511_RS02295 - 424803..425915 (-) 1113 Protein_401 AAA family ATPase -
  H0511_RS02300 (STHERMO_0470) gdhA 426325..427677 (+) 1353 WP_179974286.1 NADP-specific glutamate dehydrogenase -
  H0511_RS02305 (STHERMO_0471) - 427935..428345 (+) 411 WP_100285038.1 peptide deformylase -
  H0511_RS02310 (STHERMO_0472) rcrR 428535..428978 (+) 444 WP_179972686.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  H0511_RS02315 (STHERMO_0473) rcrP 428982..430796 (+) 1815 WP_179974287.1 ABC transporter ATP-binding protein Regulator
  H0511_RS02320 (STHERMO_0474) rcrQ 430786..432564 (+) 1779 WP_179974288.1 ABC transporter ATP-binding protein Regulator
  H0511_RS02325 (STHERMO_0475) - 432721..433158 (+) 438 WP_232086205.1 GNAT family acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 16983.43 Da        Isoelectric Point: 9.3636

>NTDB_id=1130957 H0511_RS02310 WP_179972686.1 428535..428978(+) (rcrR) [Streptococcus thermophilus isolate STH_CIRM_336]
MHGKDPFSDFREFINIMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKKLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKCVHLTDLGKKKAQDVGHFREAIHGQLLDGISKEDAETAFRVFHQIRKNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=1130957 H0511_RS02310 WP_179972686.1 428535..428978(+) (rcrR) [Streptococcus thermophilus isolate STH_CIRM_336]
ATGCATGGAAAAGATCCTTTTAGTGACTTCAGAGAATTCATCAATATTATGGAGTCTCGCGTGCAAGAGTTAGGTAAAGC
GTATGGTGTTGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTTAGGTACTTGTTTGAGAACCAAGATAAAGAGATATTTA
TCAAAGATATTGAGAAAAAACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTGTGTTCATCTGACAGACTTAGGCAAAAAGAAGGCTCAAGA
CGTCGGACATTTCCGAGAGGCTATCCATGGACAGTTATTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCATTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(42-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7H0S3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

56.028

95.918

0.537

Multiple sequence alignment