Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | H0502_RS00075 | Genome accession | NZ_LR822013 |
| Coordinates | 15928..16446 (+) | Length | 172 a.a. |
| NCBI ID | WP_002951905.1 | Uniprot ID | A0A0P6V0E7 |
| Organism | Streptococcus thermophilus isolate STH_CIRM_32 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 10928..21446
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0502_RS00045 (STHERMO_0010) | - | 11524..11868 (+) | 345 | WP_023909938.1 | hypothetical protein | - |
| H0502_RS00050 (STHERMO_0011) | - | 11855..12082 (+) | 228 | WP_011681629.1 | hypothetical protein | - |
| H0502_RS00055 (STHERMO_0012) | - | 12185..12436 (+) | 252 | WP_011226551.1 | hypothetical protein | - |
| H0502_RS00060 (STHERMO_0015) | mutY | 12763..13914 (-) | 1152 | WP_011681626.1 | A/G-specific adenine glycosylase | - |
| H0502_RS00065 (STHERMO_0016) | - | 14454..15407 (-) | 954 | WP_011681625.1 | hypothetical protein | - |
| H0502_RS00070 (STHERMO_0017) | rpsF | 15626..15916 (+) | 291 | WP_011681624.1 | 30S ribosomal protein S6 | - |
| H0502_RS00075 (STHERMO_0018) | ssb | 15928..16446 (+) | 519 | WP_002951905.1 | single-stranded DNA-binding protein | Machinery gene |
| H0502_RS00080 (STHERMO_0019) | rpsR | 16488..16727 (+) | 240 | WP_002945024.1 | 30S ribosomal protein S18 | - |
| H0502_RS00085 (STHERMO_0020) | - | 16854..17735 (-) | 882 | WP_011681623.1 | DUF4300 family protein | - |
| H0502_RS00090 (STHERMO_0021) | - | 17852..18523 (-) | 672 | WP_011681622.1 | DUF1129 domain-containing protein | - |
| H0502_RS00095 (STHERMO_0022) | - | 18594..19538 (-) | 945 | WP_002951901.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18680.41 Da Isoelectric Point: 4.7482
>NTDB_id=1130764 H0502_RS00075 WP_002951905.1 15928..16446(+) (ssb) [Streptococcus thermophilus isolate STH_CIRM_32]
MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKGANGERETDFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRAAREGHSGGSYNVGGFDNSNSFGGGASTGGSFGESQPAQSTPNFGRDESPFGNS
NPMDISDDDLPF
MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKGANGERETDFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRAAREGHSGGSYNVGGFDNSNSFGGGASTGGSFGESQPAQSTPNFGRDESPFGNS
NPMDISDDDLPF
Nucleotide
Download Length: 519 bp
>NTDB_id=1130764 H0502_RS00075 WP_002951905.1 15928..16446(+) (ssb) [Streptococcus thermophilus isolate STH_CIRM_32]
ATGATTAATAATGTCGTACTCGTTGGTCGCATGACCCGTGATGCGGAACTTCGTTACACACCAAGTAATGTTGCTGTTGC
AACATTCAGCCTTGCGGTTAATCGTAACTTTAAAGGTGCTAATGGTGAACGTGAAACTGACTTTATTAACTGTGTTATCT
GGCGCCAGCAGGCTGAAAATTTGGCTAACTGGGCTAAGAAAGGTGCATTGGTTGGAATTACAGGTCGTATTCAGACCCGT
AACTATGAAAATCAACAAGGTCAACGTGTTTACGTAACTGAAGTTGTCGCTGATAATTTCCAAATGTTGGAAAGCCGTGC
GGCACGTGAAGGTCATAGTGGTGGTTCATACAACGTTGGAGGATTTGATAATTCAAATTCATTCGGTGGTGGAGCTTCCA
CTGGTGGTTCGTTTGGTGAATCACAACCTGCACAATCTACACCAAACTTCGGTCGTGATGAAAGTCCATTTGGTAATTCA
AATCCAATGGATATTTCAGATGACGATCTTCCATTCTAA
ATGATTAATAATGTCGTACTCGTTGGTCGCATGACCCGTGATGCGGAACTTCGTTACACACCAAGTAATGTTGCTGTTGC
AACATTCAGCCTTGCGGTTAATCGTAACTTTAAAGGTGCTAATGGTGAACGTGAAACTGACTTTATTAACTGTGTTATCT
GGCGCCAGCAGGCTGAAAATTTGGCTAACTGGGCTAAGAAAGGTGCATTGGTTGGAATTACAGGTCGTATTCAGACCCGT
AACTATGAAAATCAACAAGGTCAACGTGTTTACGTAACTGAAGTTGTCGCTGATAATTTCCAAATGTTGGAAAGCCGTGC
GGCACGTGAAGGTCATAGTGGTGGTTCATACAACGTTGGAGGATTTGATAATTCAAATTCATTCGGTGGTGGAGCTTCCA
CTGGTGGTTCGTTTGGTGAATCACAACCTGCACAATCTACACCAAACTTCGGTCGTGATGAAAGTCCATTTGGTAATTCA
AATCCAATGGATATTTCAGATGACGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.621 |
100 |
0.593 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.301 |
100 |
0.587 |
| ssb | Glaesserella parasuis strain SC1401 |
32.984 |
100 |
0.366 |