Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   FGL17_RS06470 Genome accession   NZ_LR594052
Coordinates   1317889..1319247 (-) Length   452 a.a.
NCBI ID   WP_003082933.1    Uniprot ID   -
Organism   Streptococcus porcinus strain NCTC10924     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1312889..1324247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL17_RS06460 (NCTC10924_01304) rnc 1316279..1316971 (-) 693 WP_003085736.1 ribonuclease III -
  FGL17_RS06465 (NCTC10924_01305) vicX 1317076..1317888 (-) 813 WP_003084363.1 MBL fold metallo-hydrolase Regulator
  FGL17_RS06470 (NCTC10924_01306) vicK 1317889..1319247 (-) 1359 WP_003082933.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGL17_RS06475 (NCTC10924_01307) vicR 1319240..1319950 (-) 711 WP_003084933.1 response regulator YycF Regulator
  FGL17_RS06480 (NCTC10924_01308) - 1320211..1320990 (+) 780 WP_003083323.1 amino acid ABC transporter ATP-binding protein -
  FGL17_RS06485 (NCTC10924_01309) - 1321003..1321821 (+) 819 WP_003083506.1 transporter substrate-binding domain-containing protein -
  FGL17_RS06490 (NCTC10924_01310) - 1321839..1322543 (+) 705 WP_003085779.1 amino acid ABC transporter permease -
  FGL17_RS06495 (NCTC10924_01311) - 1322559..1323206 (+) 648 WP_093959102.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 452 a.a.        Molecular weight: 51707.16 Da        Isoelectric Point: 5.0837

>NTDB_id=1128138 FGL17_RS06470 WP_003082933.1 1317889..1319247(-) (vicK) [Streptococcus porcinus strain NCTC10924]
MTRDIVGNLSLFELAILFLLIFVAIYFIYLAVRDYRNAKIIRQMSHKIRDLINGRYTDDINSKADIELIDLSEQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRTGQIMMINETAQKQMNISREEALTKNITDLLGSESPYTYRELVSQTPI
VTINRRDETGEFITLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTALAVEMTNFTAFMTSILNRFDLVRNQNTVAGKTYEIIRDYPIKS
IWLEIDNDKMTQVIENILNNAIKYSPDGGKIRVKMKTTDSQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIVKQHKGFIWAKSDYGKGSTFTIVLPYDKDVMSDDVDEWEDDID

Nucleotide


Download         Length: 1359 bp        

>NTDB_id=1128138 FGL17_RS06470 WP_003082933.1 1317889..1319247(-) (vicK) [Streptococcus porcinus strain NCTC10924]
ATGACTAGAGACATTGTTGGAAATTTATCTTTATTTGAATTAGCAATACTCTTCTTATTGATTTTTGTTGCTATCTATTT
TATTTATTTAGCTGTTCGCGATTATCGTAATGCTAAAATTATCAGACAAATGAGTCACAAAATTCGTGATTTGATTAACG
GTCGTTATACTGATGATATTAATAGCAAAGCAGACATTGAATTAATTGACCTATCAGAACAACTTAATGATCTATCAGAT
GTTTTTCGTCTCACCCATGAAAATTTAGCTCAGGAGAAGAATCGTCTGGCTAGCATTTTGGCTTATATGAGTGATGGTGT
TTTAGCGACTGACCGAACTGGTCAGATTATGATGATTAATGAAACAGCACAAAAACAGATGAACATCAGTCGTGAGGAGG
CCCTTACAAAGAATATAACTGATCTTTTGGGTAGTGAATCTCCTTATACTTATAGGGAATTAGTGTCTCAAACACCAATT
GTTACCATAAATCGGCGTGATGAGACAGGCGAATTTATCACATTGCGCTTGCGTTTCGCACTGAATAGACGTGAAAGTGG
CTTTATTTCAGGTTTGGTCGTCGTATTGCACGACACTACTGAACAAGAAAAAGAAGAAAGGGAGCGTCGTCTTTTTGTTT
CCAACGTTAGCCATGAGCTGAGAACTCCTTTGACTTCGGTTAAATCATACCTGGAAGCACTTGATGAGGGAGCCTTAAAA
GAGGACATTGCTCCAAGTTTTATTAAAGTTTCACTTGATGAAACTAATCGGATGATGCGGATGATTTCCGATCTTTTGAA
TTTGTCACGAATAGATAATCAGGTGACAGCGTTAGCCGTTGAGATGACTAACTTTACAGCTTTTATGACCTCAATCTTAA
ATCGATTTGATTTGGTTCGCAACCAAAATACAGTTGCCGGTAAGACATATGAGATAATCCGTGATTATCCCATAAAGTCA
ATTTGGTTAGAAATTGATAATGATAAGATGACCCAGGTCATTGAAAATATTTTAAATAATGCTATTAAATATTCTCCTGA
TGGAGGTAAAATTCGAGTTAAAATGAAAACTACTGATAGCCAGCTAATTATCTCCATTTCTGATCAAGGTTTAGGAATTC
CTAAAAAAGATCTCCCTTTAATTTTCGACCGATTCTATCGTGTTGATAAAGCACGTAGCCGGGCGCAGGGTGGAACAGGA
CTAGGGTTGGCTATTGCAAAAGAGATTGTCAAACAACATAAGGGCTTTATTTGGGCTAAAAGTGATTACGGTAAGGGTTC
GACCTTTACAATTGTTCTTCCTTATGACAAAGATGTGATGTCAGATGATGTTGATGAATGGGAGGACGATATTGATTAA

Domains

Predicted by InterproScan.

PAS fold (PAS)

(95-198)

His Kinase A (phospho-acceptor) domain (HisKA)

(209-273)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(326-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.705

91.593

0.666
  micB Streptococcus pneumoniae Cp1015

64.665

95.796

0.619

Multiple sequence alignment