Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGL17_RS06465 Genome accession   NZ_LR594052
Coordinates   1317076..1317888 (-) Length   270 a.a.
NCBI ID   WP_003084363.1    Uniprot ID   A0A4V0H7Z6
Organism   Streptococcus porcinus strain NCTC10924     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1312076..1322888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL17_RS06455 (NCTC10924_01303) smc 1312733..1316278 (-) 3546 WP_093959101.1 chromosome segregation protein SMC -
  FGL17_RS06460 (NCTC10924_01304) rnc 1316279..1316971 (-) 693 WP_003085736.1 ribonuclease III -
  FGL17_RS06465 (NCTC10924_01305) vicX 1317076..1317888 (-) 813 WP_003084363.1 MBL fold metallo-hydrolase Regulator
  FGL17_RS06470 (NCTC10924_01306) vicK 1317889..1319247 (-) 1359 WP_003082933.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGL17_RS06475 (NCTC10924_01307) vicR 1319240..1319950 (-) 711 WP_003084933.1 response regulator YycF Regulator
  FGL17_RS06480 (NCTC10924_01308) - 1320211..1320990 (+) 780 WP_003083323.1 amino acid ABC transporter ATP-binding protein -
  FGL17_RS06485 (NCTC10924_01309) - 1321003..1321821 (+) 819 WP_003083506.1 transporter substrate-binding domain-containing protein -
  FGL17_RS06490 (NCTC10924_01310) - 1321839..1322543 (+) 705 WP_003085779.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30374.41 Da        Isoelectric Point: 5.5848

>NTDB_id=1128137 FGL17_RS06465 WP_003084363.1 1317076..1317888(-) (vicX) [Streptococcus porcinus strain NCTC10924]
MLEQEGFKYSILASGSTGNSFYLETPKKRILVDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARKYHL
DIYANQKTWQIIDDRNMIGKIDSNQKYIFDRDKVMTFGDLDIESFGVSHDAADPQFYRFMKDNKSFVMLTDTGYVSDRMS
GIIDNADAYLIESNHDIEILRSGSYPWSLKQRILSDKGHLSNEDGAGAMIRSIGYKTKKIFLGHLSKENNIKELAHMTME
NQLAMADLAVGTDFKVYDTSPDSACSLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1128137 FGL17_RS06465 WP_003084363.1 1317076..1317888(-) (vicX) [Streptococcus porcinus strain NCTC10924]
ATGCTAGAACAAGAAGGATTTAAATATAGTATTTTAGCATCGGGTTCTACGGGTAATAGTTTCTATTTAGAAACCCCTAA
AAAACGGATTCTTGTTGATGCAGGTTTGACTGGTAAAAAAATTACCAGTCTCTTAGCAGAAATAGATCGGAAGCCAGAAG
ATTTAGATGCTATATTAATTACACATGAACATTCTGATCATATAAAAGGAGTCGGTGTCCTTGCTCGTAAGTATCATCTT
GATATTTATGCTAACCAAAAAACGTGGCAGATTATTGATGATAGAAATATGATTGGAAAAATTGATTCGAATCAAAAATA
TATTTTTGACCGTGATAAGGTCATGACGTTTGGAGATCTTGATATTGAAAGTTTTGGTGTTAGTCACGATGCGGCAGATC
CCCAATTTTACCGTTTTATGAAAGATAATAAATCATTTGTTATGTTAACAGATACTGGTTATGTGAGTGATCGTATGTCT
GGCATTATTGATAATGCAGATGCTTATTTGATTGAATCAAATCATGATATTGAGATTTTAAGATCAGGCTCTTATCCATG
GAGTTTAAAACAGCGGATTTTATCTGATAAGGGCCACTTGTCAAATGAAGATGGTGCTGGAGCTATGATTCGCAGCATAG
GTTATAAGACTAAGAAAATTTTCCTTGGGCACCTGAGTAAGGAAAATAACATAAAAGAATTAGCTCACATGACAATGGAA
AATCAATTAGCGATGGCGGATTTAGCAGTAGGAACTGACTTTAAAGTATATGATACATCGCCAGATAGTGCTTGCTCCTT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(16-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4V0H7Z6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.465

99.63

0.752

Multiple sequence alignment