Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FGL20_RS06600 Genome accession   NZ_LR594050
Coordinates   1343566..1344567 (-) Length   333 a.a.
NCBI ID   WP_003083982.1    Uniprot ID   A0A4V0H703
Organism   Streptococcus porcinus strain NCTC10925     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1338566..1349567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL20_RS06585 (NCTC10925_01327) - 1339645..1340979 (-) 1335 WP_003083937.1 glycosyltransferase family 4 protein -
  FGL20_RS06590 (NCTC10925_01328) - 1340981..1341979 (-) 999 WP_003084678.1 glycosyltransferase family 4 protein -
  FGL20_RS06595 (NCTC10925_01329) - 1342057..1343520 (-) 1464 WP_093959103.1 alpha-amylase -
  FGL20_RS06600 (NCTC10925_01330) ccpA 1343566..1344567 (-) 1002 WP_003083982.1 catabolite control protein A Regulator
  FGL20_RS06605 (NCTC10925_01331) - 1344741..1345826 (+) 1086 WP_093959104.1 aminopeptidase P family protein -
  FGL20_RS06610 (NCTC10925_01332) - 1345882..1346970 (-) 1089 WP_003083493.1 DUF871 domain-containing protein -
  FGL20_RS06615 (NCTC10925_01333) celB 1347031..1348368 (-) 1338 WP_093959105.1 PTS cellobiose transporter subunit IIC -
  FGL20_RS06620 (NCTC10925_01334) - 1348395..1348913 (-) 519 WP_003085066.1 hypothetical protein -
  FGL20_RS06625 (NCTC10925_01335) - 1348944..1349258 (-) 315 WP_003082553.1 PTS cellobiose transporter subunit IIA -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36634.66 Da        Isoelectric Point: 5.3037

>NTDB_id=1128049 FGL20_RS06600 WP_003083982.1 1343566..1344567(-) (ccpA) [Streptococcus porcinus strain NCTC10925]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAVSEVVDILAEKHQNIAFVSGPLIDEINGKVRLSGYKEGLKQNKLDYKEGLVFEANYSYKDGFELAQRVINSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVVEYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEDLEEKEI
LLNHGIKRRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1128049 FGL20_RS06600 WP_003083982.1 1343566..1344567(-) (ccpA) [Streptococcus porcinus strain NCTC10925]
ATGAACACAGATGATACTATCACGATTTACGATGTTGCTCGTGAAGCTGGTGTTTCAATGGCAACTGTTAGCCGTGTTGT
GAATGGAAATAAAAATGTTAAAGAAAATACACGTAAGAAAGTATTAGAAGTTATTGATCGTTTGGATTATCGACCTAATG
CAGTCGCTCGTGGTCTGGCAAGTAAAAAAACGACAACAGTTGGAGTTGTTATTCCTAATATTGCTAACGCCTACTTTTCA
ATCCTTGCTAAGGGAATTGACGATATTGCAGCAATGTACAAATATAATATCGTTTTAGCTTCAAGTGATGAAGACGACGA
TAAAGAAGTAAATGTTGTTAATACTTTGTTTGCTAAGCAAGTTGATGGGATTATTTTTATGGGGCATCATTTAACTGAGA
AAATTCGTGCAGAATTTTCACGGTCCAGAACTCCAATTGTATTAGCTGGAACGGTTGATTTAGAACATCAATTGCCAAGT
GTTAATATTGATTATAAAGCAGCTGTTTCTGAGGTGGTTGATATTTTAGCAGAAAAACATCAAAACATCGCTTTTGTATC
AGGGCCATTAATTGATGAAATTAATGGTAAAGTAAGATTGTCTGGTTATAAAGAAGGCTTGAAGCAAAATAAATTGGACT
ATAAAGAAGGTCTTGTTTTTGAAGCTAACTACTCTTATAAAGATGGTTTTGAGTTAGCGCAACGCGTTATCAACTCTGGG
GCAACAGCTGCCTATGTAGGGGAAGATGAACTAGCAGCGGGCTTATTAAACGGTCTCTTTGCAGCAGGTAAGAGTGTGCC
AGAAGACTTTGAAATTATTACAAGTAATGACTCACCAGTAGTAGAATATACTCGTCCAAACTTAAGTTCAATTAGTCAAC
CTGTGTATGATTTAGGTGCTGTAAGCATGCGTATGTTAACTAAAATCATGAATAAAGAAGATTTAGAAGAAAAGGAAATT
TTGTTAAATCATGGCATTAAACGTCGTGGCACAACGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4V0H703

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

76.577

100

0.766

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.287

99.399

0.55


Multiple sequence alignment