Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FGL23_RS03775 Genome accession   NZ_LR594049
Coordinates   789384..790388 (+) Length   334 a.a.
NCBI ID   WP_060970305.1    Uniprot ID   -
Organism   Streptococcus gordonii strain NCTC10231     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 784384..795388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL23_RS03755 (NCTC10231_00749) - 784790..785818 (-) 1029 WP_061603695.1 ABC transporter substrate-binding protein -
  FGL23_RS03760 (NCTC10231_00750) - 785874..786629 (-) 756 WP_061603696.1 ABC transporter ATP-binding protein -
  FGL23_RS03765 (NCTC10231_00751) - 786631..787677 (-) 1047 WP_061603697.1 FecCD family ABC transporter permease -
  FGL23_RS03770 (NCTC10231_00752) - 788137..789219 (-) 1083 WP_061594705.1 M24 family metallopeptidase -
  FGL23_RS03775 (NCTC10231_00753) ccpA 789384..790388 (+) 1005 WP_060970305.1 catabolite control protein A Regulator
  FGL23_RS03780 (NCTC10231_00754) - 790533..791531 (+) 999 WP_060970306.1 glycosyltransferase family 4 protein -
  FGL23_RS03785 (NCTC10231_00755) - 791533..792846 (+) 1314 WP_061603698.1 glycosyltransferase family 4 protein -
  FGL23_RS10910 (NCTC10231_00756) - 792882..793049 (+) 168 WP_414162783.1 hypothetical protein -
  FGL23_RS03795 (NCTC10231_00758) - 793513..794139 (+) 627 WP_081106375.1 AAA family ATPase -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 37092.16 Da        Isoelectric Point: 6.5152

>NTDB_id=1127962 FGL23_RS03775 WP_060970305.1 789384..790388(+) (ccpA) [Streptococcus gordonii strain NCTC10231]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPSITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTIDVEHQLPS
VNIDYKQATIDAITFLAKRNKKIAFVCGPLVDDINGKVRLSGYKSALKSKKLSYSEGLVFESKYSYDDGYNLAERVIASK
ATAAFVTGDELAAGLLNGLADRGVKIPEDFEIITSDDSQISRYTRPNLSTISQPLYDLGAISMRMLTKIMHKEELEEREV
VLSHGIYERDSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1127962 FGL23_RS03775 WP_060970305.1 789384..790388(+) (ccpA) [Streptococcus gordonii strain NCTC10231]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCCCGTGAAGCAGGGGTTTCTATGGCGACAGTTAGTCGTGTAGT
TAATGGAAACAAGAATGTAAAAGAAAACACTCGGAAAAAAGTTTTGGAAGTAATTGATCGCCTTGATTATCGTCCAAATG
CAGTAGCTCGTGGTTTGGCTAGCAAGAAGACTACGACAGTTGGAGTTGTGATTCCAAGTATTACAAATAGTTATTTCTCA
ACACTAGCAAAAGGAATTGATGATATTGCTGAGATGTATAAATACAATATCGTCCTAGCAAATAGTGACGAGGATGATGA
TAAGGAAGTTTCTGTTGTAAACACTCTCTTTTCGAAACAAGTAGATGGTATTATCTTTATGGGCTACCACCTTACAGAAA
AGATTCGTTCAGAATTTTCACGCTCACGAACGCCAGTTGTCTTGGCTGGAACTATTGATGTGGAGCACCAATTGCCAAGT
GTTAATATAGATTATAAACAAGCTACGATTGACGCTATCACATTCCTTGCTAAGCGTAATAAAAAAATTGCTTTTGTATG
TGGACCTTTAGTTGATGATATCAATGGAAAAGTACGCTTATCCGGTTATAAATCGGCTCTTAAGAGCAAAAAGCTGTCAT
ACAGCGAAGGTCTTGTTTTTGAGTCTAAGTATAGCTATGATGATGGCTATAATTTAGCTGAACGAGTAATTGCTTCTAAA
GCAACGGCTGCTTTTGTTACAGGTGATGAGCTGGCAGCTGGTCTTTTAAACGGACTAGCTGATCGTGGAGTAAAAATTCC
AGAGGATTTTGAGATTATCACTAGCGATGATTCACAAATATCTCGCTATACACGTCCAAATTTGTCGACTATCAGCCAGC
CTTTATATGATTTAGGTGCTATTAGTATGCGTATGCTGACTAAAATTATGCACAAGGAAGAGTTGGAAGAACGCGAAGTT
GTTCTGTCTCATGGTATTTACGAACGGGACTCAACTAGAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

98.802

100

0.988

  ccpA Streptococcus pneumoniae D39

87.126

100

0.871

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.1

99.102

0.566


Multiple sequence alignment