Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FGL18_RS02915 Genome accession   NZ_LR594046
Coordinates   551108..552109 (+) Length   333 a.a.
NCBI ID   WP_003049927.1    Uniprot ID   A0A9X5LWR8
Organism   Streptococcus dysgalactiae strain NCTC6403     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 546108..557109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL18_RS02890 (NCTC6403_00587) - 546159..547085 (-) 927 WP_138125006.1 glycosyltransferase family 2 protein -
  FGL18_RS02895 (NCTC6403_00588) - 547222..548406 (-) 1185 WP_138125008.1 DNA/RNA non-specific endonuclease -
  FGL18_RS02900 (NCTC6403_00589) - 548752..549129 (-) 378 WP_138125010.1 VOC family protein -
  FGL18_RS02905 (NCTC6403_00590) - 549140..549805 (-) 666 WP_138125012.1 NAD(P)H-dependent oxidoreductase -
  FGL18_RS02910 (NCTC6403_00591) - 549849..550934 (-) 1086 WP_138125014.1 Xaa-Pro peptidase family protein -
  FGL18_RS02915 (NCTC6403_00592) ccpA 551108..552109 (+) 1002 WP_003049927.1 catabolite control protein A Regulator
  FGL18_RS02920 (NCTC6403_00593) - 552263..553726 (+) 1464 WP_138125016.1 alpha-amylase -
  FGL18_RS02925 (NCTC6403_00594) - 553803..554801 (+) 999 WP_138125018.1 glycosyltransferase -
  FGL18_RS02930 (NCTC6403_00595) - 554803..556137 (+) 1335 WP_138125020.1 glycosyltransferase family 4 protein -
  FGL18_RS02935 (NCTC6403_00596) - 556245..556613 (+) 369 WP_138125022.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36683.74 Da        Isoelectric Point: 5.7248

>NTDB_id=1127793 FGL18_RS02915 WP_003049927.1 551108..552109(+) (ccpA) [Streptococcus dysgalactiae strain NCTC6403]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVSNVVDILAENHQSIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1127793 FGL18_RS02915 WP_003049927.1 551108..552109(+) (ccpA) [Streptococcus dysgalactiae strain NCTC6403]
ATGAATACAGATGATACCATCACGATTTATGACGTTGCCCGTGAAGCTGGTGTTTCTATGGCAACTGTTAGTCGTGTTGT
TAATGGCAACAAAAACGTTAAGGAAAACACGCGTAAGAAAGTTTTAGAAGTCATTGACCGCCTAGATTATCGTCCAAATG
CTGTCGCACGTGGTCTCGCCAGCAAAAAAACAACAACCGTCGGGGTTGTGATTCCGAATATTGCAAACAGTTATTTTTCT
ATTTTAGCCAAAGGTATTGATGATATCGCCGCTATGTATAAATATAATATTGTACTTGCCTCTAGTGATGAGGATGATGA
CAAGGAGGTTAACGTTGTTAATACCCTCTTTGCTAAGCAAGTTGACGGTATTATCTTTATGGGGCACCATTTGACTGAAA
AAATCCGTGCGGAATTTTCACGCTCACGCACCCCGATTGTTTTAGCAGGGACAGTTGACCTTGATCATCAATTACCAAGT
GTTAATATTGACTATAAGGCAGCTGTGTCTAATGTGGTTGATATTTTGGCAGAAAACCATCAGAGCATTGCCTTTGTGTC
AGGACCACTTATTGATGACATCAATGGTAAAGTACGTTTGGCGGGTTACAAAGAAGGCTTGAAGCACAACAAACTTGACT
TCAAAGAAGGACTTGTTTTTGAAGCTAACTATTCTTATAAAGAAGGCTTTGAATTGGCACAACGTGTGATTAACTCAGGA
GCAACAGCAGCTTATGTGGCTGAAGATGAGTTAGCAGCGGGTCTTTTAAATGGTTTGTTTGAAGCAGGCAAACGCGTTCC
AGAAGATTTTGAAATCATCACAAGCAATGATTCACCAGTTGTTCAATATACCCGTCCAAACTTGAGTTCTATCAGCCAAC
CCGTTTACGACTTGGGAGCTGTCAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGCGGAACCACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.778

100

0.778

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553


Multiple sequence alignment