Detailed information NTG1127784

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: FGL18_RS01975
• Genome accession: NZ_LR594046
• Coordinates: 372474..373400 (+)
• Length: 308 a.a.
• NCBI ID: WP_003049687.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain NCTC6403
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 367474..378400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL18_RS01965 (NCTC6403_00402)	amiA	368936..370906 (+)	1971	WP_129555301.1	peptide ABC transporter substrate-binding protein	Regulator
FGL18_RS01970 (NCTC6403_00403)	amiC	370972..372474 (+)	1503	WP_138124802.1	ABC transporter permease	Regulator
FGL18_RS01975 (NCTC6403_00404)	amiD	372474..373400 (+)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
FGL18_RS01980 (NCTC6403_00405)	amiE	373409..374479 (+)	1071	WP_003057822.1	ABC transporter ATP-binding protein	Regulator
FGL18_RS01985 (NCTC6403_00406)	amiF	374472..375395 (+)	924	WP_138124804.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34888.93 Da
• Isoelectric Point: 9.2024

>NTDB_id=1127784 FGL18_RS01975 WP_003049687.1 372474..373400(+) (amiD) [Streptococcus dysgalactiae strain NCTC6403]
METIDKSKFRFVERDSRASEVIDTPAYSYWKSVFRQFFSKKSTIFMLMILVTILLMSFIYPMFANYDFGDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINVTIGVILGAIWGVSKAFDKVMIEIYNVISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRYRDLEYNLASQTLGTPMYKIAIKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRLIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=1127784 FGL18_RS01975 WP_003049687.1 372474..373400(+) (amiD) [Streptococcus dysgalactiae strain NCTC6403]
ATGGAAACGATTGATAAATCAAAATTTCGATTTGTTGAGCGCGATAGCAGAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTATTGGAAATCCGTATTCCGTCAATTTTTCTCTAAAAAGTCTACTATCTTCATGCTAATGATTTTAGTGACCATCT
TATTGATGAGTTTTATTTACCCAATGTTTGCAAATTATGACTTTGGTGATGTGAGTAATATCAACGATTTCTCGAAACGT
TACATTTGGCCCAATGCCGAATACTGGTTTGGAACAGATAAAAACGGACAATCTTTGTTTGATGGTGTCTGGTATGGAGC
GCGTAACTCTATCCTAATTTCTGTTATAGCAACATTGATTAATGTGACTATCGGAGTTATTTTAGGAGCTATTTGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAGATTTATAATGTCATCTCAAACATTCCTTCAATGTTAATTATCATTGTT
TTGACCTATTCATTAGGTGCTGGTTTTTGGAATTTGATTTTAGCTTTCTGTATCACTGGATGGATCGGTGTAGCTTACTC
TATCCGTGTGCAAATCTTACGTTACCGTGATTTGGAGTACAACCTTGCTAGCCAAACCCTAGGAACACCAATGTACAAAA
TTGCCATTAAGAACCTCTTGCCTCAATTGGTTTCAGTTATCATGACCATGTTGTCACAAATGTTACCAGTGTACGTGTCT
TCTGAGGCTTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACGACTCCAAGCTTAGGGCGTTTGATTGCTAATTATTC
AAGCAACTTAACAACAAATGCTTACCTCTTCTGGATTCCCTTAGTAACGTTGATTTTAGTATCATTACCATTGTATATTG
TCGGACAAAACCTGGCAGATGCCAGCGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.052	100	0.731
amiD	Streptococcus thermophilus LMG 18311	73.052	100	0.731
amiD	Streptococcus thermophilus LMD-9	73.052	100	0.731