Detailed information NTG1127786

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGL18_RS01985
• Genome accession: NZ_LR594046
• Coordinates: 374472..375395 (+)
• Length: 307 a.a.
• NCBI ID: WP_138124804.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain NCTC6403
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 369472..380395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL18_RS01970 (NCTC6403_00403)	amiC	370972..372474 (+)	1503	WP_138124802.1	ABC transporter permease	Regulator
FGL18_RS01975 (NCTC6403_00404)	amiD	372474..373400 (+)	927	WP_003049687.1	oligopeptide ABC transporter permease OppC	Regulator
FGL18_RS01980 (NCTC6403_00405)	amiE	373409..374479 (+)	1071	WP_003057822.1	ABC transporter ATP-binding protein	Regulator
FGL18_RS01985 (NCTC6403_00406)	amiF	374472..375395 (+)	924	WP_138124804.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34768.92 Da
• Isoelectric Point: 6.4058

>NTDB_id=1127786 FGL18_RS01985 WP_138124804.1 374472..375395(+) (amiF) [Streptococcus dysgalactiae strain NCTC6403]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGDILYDGKVINRRKSKS
ESNELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKKMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELIVYNPEQHDYTEDKPTMVEIKPNHFVWANQAEVEKYKAEQ

Nucleotide

• Length: 924 bp

>NTDB_id=1127786 FGL18_RS01985 WP_138124804.1 374472..375395(+) (amiF) [Streptococcus dysgalactiae strain NCTC6403]
ATGTCTGAGAAATTAGTCGAAGTTAAAGACCTAGAAATTTCCTTCGGAGAGGGAAAGAAAAAATTTGTTGCGGTTAAAAA
TGCCAATTTCTTTATCAAAAAAGGTGAAACATTCTCTTTAGTTGGAGAATCTGGAAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAATGATACCAGCTCTGGTGACATCCTTTATGATGGAAAAGTTATCAATCGAAGAAAGTCAAAATCA
GAATCAAATGAGCTCATTCGTAAGATTCAAATGATTTTCCAAGACCCTGCAGCTAGTCTGAATGAACGTGCAACTGTTGA
CTATATCATTTCAGAAGGTCTTTATAATTTTAATCTGTTCAAAACAGAAGAAGAGCGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGTTATCAGAACATTTAACTCGCTATCCTCACGAATTTTCAGGGGGGCAACGCCAGCGGATCGGT
ATCGCTAGAGCCCTAGTGATGAATCCCGAATTTGTCATTGCTGACGAACCTATCTCCGCTCTAGACGTCTCTGTTCGAGC
ACAGGTCTTGAATCTTCTTAAAAAAATGCAAGCCGAAAAAGGACTGACATATCTTTTCATCGCCCACGACCTATCAGTTG
TTCGCTTCATTTCAGATCGTATTGCGGTTATCCATAAAGGTGTTATTGTGGAGGTTGCTGAAACAGAAGAACTGTTCAAT
AATCCTATCCACCCGTATACAAAATCTCTTTTATCAGCTGTTCCGATTCCAGATCCAATATTGGAACGTCAAAAAGAGCT
TATTGTCTATAATCCAGAGCAACATGACTATACAGAAGATAAACCAACGATGGTTGAAATTAAGCCAAATCACTTTGTCT
GGGCTAATCAAGCAGAAGTTGAAAAGTATAAAGCAGAACAATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.085	100	0.821
amiF	Streptococcus thermophilus LMD-9	81.759	100	0.818
amiF	Streptococcus salivarius strain HSISS4	81.759	100	0.818