Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC/comC1   Type   Regulator
Locus tag   FGL06_RS08330 Genome accession   NZ_LR594042
Coordinates   1674451..1674606 (+) Length   51 a.a.
NCBI ID   WP_126438121.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC8133     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1669451..1679606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL06_RS08300 (NCTC8133_01680) comD/comD3 1670191..1671576 (-) 1386 WP_231997656.1 GHKL domain-containing protein Regulator
  FGL06_RS08305 (NCTC8133_01681) comD/comD3 1671567..1672958 (-) 1392 WP_231997657.1 GHKL domain-containing protein Regulator
  FGL06_RS08310 (NCTC8133_01682) - 1672959..1673156 (-) 198 WP_126438119.1 hypothetical protein -
  FGL06_RS08315 (NCTC8133_01683) - 1673318..1673611 (-) 294 WP_024344358.1 bacteriocin immunity protein -
  FGL06_RS08320 (NCTC8133_01684) - 1673642..1673947 (-) 306 WP_033153382.1 bacteriocin immunity protein -
  FGL06_RS08325 (NCTC8133_01685) - 1673967..1674254 (-) 288 WP_164554332.1 DUF3884 family protein -
  FGL06_RS08330 (NCTC8133_01686) comC/comC1 1674451..1674606 (+) 156 WP_126438121.1 competence protein Regulator
  FGL06_RS08335 (NCTC8133_01687) - 1674627..1675952 (-) 1326 WP_126438122.1 sensor histidine kinase -
  FGL06_RS08340 (NCTC8133_01688) comE/comE1 1675957..1676688 (-) 732 WP_074567288.1 response regulator transcription factor Regulator
  FGL06_RS09360 (NCTC8133_01691) - 1677551..1677655 (-) 105 WP_231997659.1 bacteriocin class II family protein -
  FGL06_RS08350 (NCTC8133_01693) - 1678573..1679184 (-) 612 WP_231997660.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 51 a.a.        Molecular weight: 5716.55 Da        Isoelectric Point: 6.2051

>NTDB_id=1127594 FGL06_RS08330 WP_126438121.1 1674451..1674606(+) (comC/comC1) [Streptococcus equinus strain NCTC8133]
MNEWKLSELNSVRNLTEADLEKTVGGDTTLLTGVGIFDWLKNLKNKPQGKI

Nucleotide


Download         Length: 156 bp        

>NTDB_id=1127594 FGL06_RS08330 WP_126438121.1 1674451..1674606(+) (comC/comC1) [Streptococcus equinus strain NCTC8133]
ATGAATGAATGGAAATTATCAGAATTAAACTCTGTTAGAAATTTAACAGAAGCTGATTTGGAGAAGACCGTTGGAGGAGA
TACCACTCTACTCACTGGTGTTGGCATTTTTGATTGGTTGAAAAATTTGAAAAATAAGCCACAAGGAAAAATTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC/comC1 Streptococcus equinus JB1

61.905

82.353

0.51

Multiple sequence alignment