Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   FGK97_RS03295 Genome accession   NZ_LR594037
Coordinates   661463..662467 (+) Length   334 a.a.
NCBI ID   WP_138099379.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC11064     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 656463..667467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK97_RS03275 (NCTC11064_00666) - 657292..658164 (+) 873 WP_051148113.1 hypothetical protein -
  FGK97_RS03280 - 658227..658682 (+) 456 WP_003025170.1 hypothetical protein -
  FGK97_RS03285 (NCTC11064_00668) - 658691..659746 (+) 1056 WP_106079246.1 LTA synthase family protein -
  FGK97_RS03290 (NCTC11064_00669) - 660116..661198 (-) 1083 WP_003025164.1 M24 family metallopeptidase -
  FGK97_RS03295 (NCTC11064_00670) ccpA 661463..662467 (+) 1005 WP_138099379.1 catabolite control protein A Regulator
  FGK97_RS03300 (NCTC11064_00671) - 662647..663645 (+) 999 WP_021001528.1 glycosyltransferase family 4 protein -
  FGK97_RS03305 (NCTC11064_00672) - 663647..664960 (+) 1314 WP_057489614.1 glycosyltransferase family 4 protein -
  FGK97_RS03310 (NCTC11064_00673) - 664987..665328 (+) 342 WP_021001530.1 hypothetical protein -
  FGK97_RS03315 (NCTC11064_00674) micA 665618..666319 (+) 702 WP_021001531.1 response regulator YycF Regulator

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36987.13 Da        Isoelectric Point: 5.5322

>NTDB_id=1127417 FGK97_RS03295 WP_138099379.1 661463..662467(+) (ccpA) [Streptococcus anginosus strain NCTC11064]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPI
VNIDYKQATMDAVECLTKNNQKIAFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKGVNIPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1127417 FGK97_RS03295 WP_138099379.1 661463..662467(+) (ccpA) [Streptococcus anginosus strain NCTC11064]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCGCGTGAAGCGGGAGTTTCGATGGCAACCGTTAGCCGTGTGGT
AAATGGAAACAAAAATGTAAAAGAAAATACAAGAAAAAAAGTCTTGGAAGTGATTGACCGCTTGGATTACCGACCAAATG
CGGTAGCGCGTGGCTTAGCTAGCAAAAAGACGACAACTGTCGGGGTTGTCATTCCAAATATCACAAGCAGTTATTTTGCA
ACGCTTGCAAAAGGAATTGATGATATCGCAGAGATGTACAAATATAATATTGTCTTAGCCAATAGTGATGAAGATGATGA
CAAAGAAGTTTCTGTTGTCAATACGCTGTTCTCAAAACAAGTAGATGGTATCATTTTTATGGGCTATCATTTAACAGAAA
AGATTCGCTCCGAGTTTTCTCGTTCGCGGACGCCAGTTGTGCTTGCAGGCACAGTTGATGTGGAGCATCAATTACCAATT
GTGAATATTGACTATAAGCAAGCAACCATGGATGCAGTTGAATGTCTTACGAAAAATAATCAAAAAATTGCTTTTGTAAG
CGGACCTTTGGTGGATGATATCAATGGTAAGATTCGTTTAGCTGGTTACAAAGAAGCTTTGAAGAAAGCTAAACTTACCT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATACAGCTATGATGATGGTTATCAATTAGCAGAACGGGTCATTGCTTCTAAA
GCTACAGCAGCCTTTGTGACTGGTGATGAACTGGCAGCTGGATTGTTAAATGGATTATCAGACAAAGGTGTAAATATACC
AGAAGATTTTGAAATCATTACTAGTGATGATTCGCAGGTAGCACGTTTTACCCGTCCAAATTTGACGACTATTGGTCAGC
CTTTGTATGACCTCGGTGCGATTAGTATGCGCATGTTGACTAAGATTATGCACAAGGAAGAGCTAGAAGAACGCGAAGTG
GTATTAGCTCATGGTCTTATTGAGCGCCGTTCAACAAGAAAGTAA

Domains

Predicted by InterProScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.12

100

0.901
  ccpA Streptococcus pneumoniae D39

88.024

100

0.88
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569

Multiple sequence alignment