Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | FGK97_RS01045 | Genome accession | NZ_LR594037 |
| Coordinates | 194389..195342 (+) | Length | 317 a.a. |
| NCBI ID | WP_138099333.1 | Uniprot ID | - |
| Organism | Streptococcus anginosus strain NCTC11064 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 189389..200342
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGK97_RS01005 (NCTC11064_00197) | - | 190282..190647 (+) | 366 | WP_003027003.1 | DUF1033 family protein | - |
| FGK97_RS01010 (NCTC11064_00198) | comYA | 190717..191658 (+) | 942 | WP_003027001.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FGK97_RS01015 (NCTC11064_00199) | comYB | 191600..192622 (+) | 1023 | WP_041783985.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FGK97_RS01020 (NCTC11064_00200) | comYC | 192619..192936 (+) | 318 | WP_003028473.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGK97_RS01025 (NCTC11064_00201) | comYD | 192896..193324 (+) | 429 | WP_171004445.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| FGK97_RS01030 (NCTC11064_00202) | comGE/cglE | 193296..193589 (+) | 294 | WP_021001233.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| FGK97_RS01035 (NCTC11064_00203) | comGF/cglF | 193573..194010 (+) | 438 | WP_041783987.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| FGK97_RS01040 (NCTC11064_00204) | comGG | 193991..194317 (+) | 327 | WP_021001234.1 | competence type IV pilus minor pilin ComGG | - |
| FGK97_RS01045 (NCTC11064_00205) | comYH | 194389..195342 (+) | 954 | WP_138099333.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FGK97_RS01050 (NCTC11064_00206) | - | 195389..196588 (+) | 1200 | WP_021001236.1 | acetate kinase | - |
| FGK97_RS01055 (NCTC11064_00207) | glmS | 196940..198754 (+) | 1815 | WP_138099541.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36049.97 Da Isoelectric Point: 4.3900
>NTDB_id=1127393 FGK97_RS01045 WP_138099333.1 194389..195342(+) (comYH) [Streptococcus anginosus strain NCTC11064]
MNFEKIEQAYTLLLENVQEIQNDLLTSFYDALIEQNGSYLDGDIELDSVRQNNEKLKALKLSKEEWRRAYQFLLMKAAQT
EPLKANHQFTPDSIGFILTFLIDQLSKKEHIDILEIGSGMGNLAETILNNTKKNVDYLGLELDDLLIDISASIADVMDAK
VSFVQGDAVRPQVLKESDVIISDLPVGFYPDDNIAMRYEVASRQEHTYAHHLLMEQSLKYLKSDGYAIFLAPNDLLTSSQ
SDLLKKWLQKHAQIVAMIALPESLFGNAAYAKTIFVLKKQDEQAIQPFVYALSDLQNQADLLTFSEKFQNWSQESEI
MNFEKIEQAYTLLLENVQEIQNDLLTSFYDALIEQNGSYLDGDIELDSVRQNNEKLKALKLSKEEWRRAYQFLLMKAAQT
EPLKANHQFTPDSIGFILTFLIDQLSKKEHIDILEIGSGMGNLAETILNNTKKNVDYLGLELDDLLIDISASIADVMDAK
VSFVQGDAVRPQVLKESDVIISDLPVGFYPDDNIAMRYEVASRQEHTYAHHLLMEQSLKYLKSDGYAIFLAPNDLLTSSQ
SDLLKKWLQKHAQIVAMIALPESLFGNAAYAKTIFVLKKQDEQAIQPFVYALSDLQNQADLLTFSEKFQNWSQESEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1127393 FGK97_RS01045 WP_138099333.1 194389..195342(+) (comYH) [Streptococcus anginosus strain NCTC11064]
ATGAATTTTGAAAAAATTGAACAGGCTTATACGCTCTTGTTAGAAAATGTCCAAGAAATCCAAAATGATCTTTTAACGAG
CTTTTATGATGCTTTGATAGAGCAAAATGGCAGCTATTTGGACGGGGATATCGAACTAGATAGTGTTCGGCAGAACAATG
AAAAACTGAAAGCGTTGAAATTAAGTAAAGAAGAATGGCGTCGAGCCTACCAATTTTTGCTGATGAAAGCAGCTCAAACA
GAGCCTTTGAAAGCCAATCATCAATTTACTCCAGATTCTATCGGGTTTATCTTAACTTTTCTCATTGACCAATTGAGTAA
AAAAGAACACATTGATATTTTGGAAATTGGTAGCGGAATGGGGAATTTAGCAGAGACCATTCTCAATAATACAAAGAAAA
ATGTGGATTATCTAGGACTGGAATTGGACGATCTGCTAATTGATATATCAGCCAGTATCGCAGATGTGATGGATGCAAAA
GTTAGTTTTGTGCAAGGTGATGCAGTGCGTCCGCAAGTATTGAAAGAAAGCGATGTGATTATCAGTGATTTACCAGTTGG
CTTTTATCCTGATGATAACATTGCGATGCGCTATGAAGTGGCTAGTAGACAGGAGCATACTTATGCTCATCATTTGTTAA
TGGAACAATCGCTCAAGTATCTCAAATCGGATGGTTATGCTATTTTCCTTGCACCGAATGATTTATTGACTAGTTCGCAA
AGTGATTTATTGAAGAAATGGCTACAAAAGCATGCACAAATAGTTGCAATGATTGCGTTACCAGAGTCTCTTTTTGGAAA
TGCAGCATACGCTAAAACAATTTTTGTACTGAAAAAGCAAGATGAACAAGCTATCCAACCATTTGTTTATGCTTTATCTG
ATTTGCAGAATCAAGCGGATTTATTGACATTTAGCGAAAAGTTTCAAAATTGGAGCCAAGAAAGTGAAATTTAA
ATGAATTTTGAAAAAATTGAACAGGCTTATACGCTCTTGTTAGAAAATGTCCAAGAAATCCAAAATGATCTTTTAACGAG
CTTTTATGATGCTTTGATAGAGCAAAATGGCAGCTATTTGGACGGGGATATCGAACTAGATAGTGTTCGGCAGAACAATG
AAAAACTGAAAGCGTTGAAATTAAGTAAAGAAGAATGGCGTCGAGCCTACCAATTTTTGCTGATGAAAGCAGCTCAAACA
GAGCCTTTGAAAGCCAATCATCAATTTACTCCAGATTCTATCGGGTTTATCTTAACTTTTCTCATTGACCAATTGAGTAA
AAAAGAACACATTGATATTTTGGAAATTGGTAGCGGAATGGGGAATTTAGCAGAGACCATTCTCAATAATACAAAGAAAA
ATGTGGATTATCTAGGACTGGAATTGGACGATCTGCTAATTGATATATCAGCCAGTATCGCAGATGTGATGGATGCAAAA
GTTAGTTTTGTGCAAGGTGATGCAGTGCGTCCGCAAGTATTGAAAGAAAGCGATGTGATTATCAGTGATTTACCAGTTGG
CTTTTATCCTGATGATAACATTGCGATGCGCTATGAAGTGGCTAGTAGACAGGAGCATACTTATGCTCATCATTTGTTAA
TGGAACAATCGCTCAAGTATCTCAAATCGGATGGTTATGCTATTTTCCTTGCACCGAATGATTTATTGACTAGTTCGCAA
AGTGATTTATTGAAGAAATGGCTACAAAAGCATGCACAAATAGTTGCAATGATTGCGTTACCAGAGTCTCTTTTTGGAAA
TGCAGCATACGCTAAAACAATTTTTGTACTGAAAAAGCAAGATGAACAAGCTATCCAACCATTTGTTTATGCTTTATCTG
ATTTGCAGAATCAAGCGGATTTATTGACATTTAGCGAAAAGTTTCAAAATTGGAGCCAAGAAAGTGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
61.587 |
99.369 |
0.612 |
| comYH | Streptococcus mutans UA159 |
61.27 |
99.369 |
0.609 |