Detailed information NTG1127359

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGK96_RS07960
• Genome accession: NZ_LR594036
• Coordinates: 1644462..1645385 (-)
• Length: 307 a.a.
• NCBI ID: WP_138082900.1
• Uniprot ID: -
• Organism: Streptococcus porcinus strain NCTC10710
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1639462..1650385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK96_RS07960 (NCTC10710_01650)	amiF	1644462..1645385 (-)	924	WP_138082900.1	ATP-binding cassette domain-containing protein	Regulator
FGK96_RS07965 (NCTC10710_01651)	amiE	1645378..1646448 (-)	1071	WP_138082902.1	ABC transporter ATP-binding protein	Regulator
FGK96_RS07970 (NCTC10710_01652)	amiD	1646463..1647389 (-)	927	WP_138082904.1	oligopeptide ABC transporter permease OppC	Regulator
FGK96_RS07975 (NCTC10710_01653)	amiC	1647389..1648888 (-)	1500	WP_138082906.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34624.02 Da
• Isoelectric Point: 7.5580

>NTDB_id=1127359 FGK96_RS07960 WP_138082900.1 1644462..1645385(-) (amiF) [Streptococcus porcinus strain NCTC10710]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSKGEILYNGKVINGKKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERQEKIKNMMSEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMDPEFVIADEPISALDVSVRAQVLNLLKRMQKEKGLTYLFIAHDLSVVRFISDRIAVIHKGIIVEVAETEELFV
NPVHPYTKSLLSAVPIPDPILERKKKLIVYSVDQHDYSVDKPEMVEIKPGHFVWANKAEVAKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1127359 FGK96_RS07960 WP_138082900.1 1644462..1645385(-) (amiF) [Streptococcus porcinus strain NCTC10710]
ATGTCTGAGAAATTAGTTGAAGTCAAAGACTTAGAAATTTCCTTCGGTGAAGGAAAGAAAAAATTTGTAGCAGTTAAAAA
TGCTAACTTCTTTATTAACAAAGGAGAGACCTTCTCTCTCGTGGGAGAATCGGGATCTGGCAAGACCACAATTGGACGTG
CTATCATTGGTTTGAATGATACAAGTAAAGGGGAAATTCTTTACAACGGAAAAGTGATAAATGGTAAAAAGTCAAAATCT
GAAGCAAATGAATTAATACGTAAGATTCAGATGATTTTCCAAGATCCAGCTGCCAGCTTAAATGAGCGGGCAACGGTTGA
TTATATCATTTCAGAAGGTCTTTATAATTTTAATCTCTTTAAAACTGAAGAAGAACGGCAAGAAAAGATAAAAAATATGA
TGTCAGAGGTAGGTCTGTTATCAGAACACCTCACGCGTTATCCCCACGAATTTTCTGGTGGACAACGCCAGAGGATTGGA
ATTGCACGTGCTTTAGTGATGGATCCAGAGTTTGTCATTGCAGATGAACCTATATCAGCCCTTGACGTCTCTGTTCGTGC
CCAAGTCCTAAACCTTTTGAAAAGAATGCAAAAAGAAAAAGGATTAACTTATCTCTTTATTGCGCATGATTTATCAGTTG
TACGTTTTATATCAGATCGAATAGCAGTTATCCATAAAGGGATCATCGTTGAAGTCGCTGAAACAGAAGAACTCTTCGTA
AATCCAGTTCATCCTTATACCAAGTCACTTCTATCAGCAGTACCAATTCCAGACCCAATACTTGAGAGAAAGAAAAAATT
AATTGTCTACTCGGTAGACCAGCATGACTATTCAGTTGATAAACCTGAGATGGTAGAAATAAAACCAGGACATTTTGTAT
GGGCTAACAAAGCTGAAGTCGCTAAATATCAAAAAGAACTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	83.333	99.674	0.831
amiF	Streptococcus thermophilus LMD-9	83.007	99.674	0.827
amiF	Streptococcus salivarius strain HSISS4	83.007	99.674	0.827