Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   FGK96_RS06850 Genome accession   NZ_LR594036
Coordinates   1433505..1434506 (-) Length   333 a.a.
NCBI ID   WP_003083982.1    Uniprot ID   A0A4V0H703
Organism   Streptococcus porcinus strain NCTC10710     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1428505..1439506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK96_RS06835 (NCTC10710_01418) - 1429585..1430919 (-) 1335 WP_138082526.1 glycosyltransferase family 4 protein -
  FGK96_RS06840 (NCTC10710_01419) - 1430921..1431919 (-) 999 WP_138082528.1 glycosyltransferase family 4 protein -
  FGK96_RS06845 (NCTC10710_01420) - 1431990..1433459 (-) 1470 WP_138082530.1 alpha-amylase -
  FGK96_RS06850 (NCTC10710_01421) ccpA 1433505..1434506 (-) 1002 WP_003083982.1 catabolite control protein A Regulator
  FGK96_RS06855 (NCTC10710_01422) - 1434680..1435765 (+) 1086 WP_138082532.1 aminopeptidase P family protein -
  FGK96_RS06860 (NCTC10710_01423) - 1435821..1436909 (-) 1089 WP_138082534.1 DUF871 domain-containing protein -
  FGK96_RS06865 (NCTC10710_01424) celB 1436970..1438307 (-) 1338 WP_138082536.1 PTS cellobiose transporter subunit IIC -
  FGK96_RS06870 (NCTC10710_01425) - 1438334..1438852 (-) 519 WP_138082538.1 hypothetical protein -
  FGK96_RS06875 (NCTC10710_01426) - 1438883..1439197 (-) 315 WP_138082540.1 PTS cellobiose transporter subunit IIA -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36634.66 Da        Isoelectric Point: 5.3037

>NTDB_id=1127354 FGK96_RS06850 WP_003083982.1 1433505..1434506(-) (ccpA) [Streptococcus porcinus strain NCTC10710]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAVSEVVDILAEKHQNIAFVSGPLIDEINGKVRLSGYKEGLKQNKLDYKEGLVFEANYSYKDGFELAQRVINSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVVEYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEDLEEKEI
LLNHGIKRRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1127354 FGK96_RS06850 WP_003083982.1 1433505..1434506(-) (ccpA) [Streptococcus porcinus strain NCTC10710]
ATGAACACAGATGATACTATCACGATTTACGATGTTGCTCGTGAAGCTGGTGTTTCAATGGCAACTGTTAGCCGTGTTGT
GAATGGAAATAAAAATGTTAAAGAAAATACACGTAAGAAAGTATTAGAAGTTATTGATCGTTTGGATTATCGACCTAATG
CAGTCGCTCGTGGTCTTGCAAGTAAAAAAACGACAACAGTTGGAGTTGTTATTCCTAATATTGCTAACGCCTACTTTTCA
ATCCTTGCTAAGGGAATTGACGATATTGCAGCAATGTACAAATATAATATCGTTTTAGCTTCAAGTGATGAAGACGACGA
TAAAGAAGTAAATGTTGTTAATACTTTGTTTGCTAAGCAAGTTGATGGGATTATTTTTATGGGGCATCATTTAACTGAGA
AAATTCGTGCAGAATTTTCACGGTCTAGAACTCCAATTGTATTAGCTGGAACGGTTGATTTAGAACATCAATTGCCAAGT
GTTAATATTGATTATAAAGCAGCTGTTTCTGAGGTAGTTGATATTTTAGCAGAAAAACATCAAAACATCGCTTTTGTATC
AGGACCATTAATTGATGAAATCAATGGTAAAGTAAGACTTTCTGGTTATAAAGAAGGCTTGAAACAAAATAAATTGGACT
ATAAAGAAGGCCTTGTTTTTGAAGCAAACTATTCTTATAAAGATGGTTTTGAGTTAGCGCAACGCGTTATCAACTCCGGG
GCAACAGCTGCTTATGTAGGGGAAGATGAACTAGCAGCGGGCTTATTAAATGGTCTCTTTGCAGCAGGCAAGAGTGTGCC
AGAAGACTTTGAAATTATTACAAGTAATGACTCACCAGTAGTAGAATATACTCGTCCAAACTTAAGTTCAATTAGTCAAC
CTGTGTATGATTTAGGTGCTGTAAGCATGCGTATGTTAACCAAAATCATGAATAAAGAAGATTTAGAAGAAAAAGAAATT
TTGTTAAATCATGGCATTAAACGTCGTGGCACAACGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4V0H703

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

76.577

100

0.766

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.287

99.399

0.55


Multiple sequence alignment