Detailed information NTG1127289

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: FGL04_RS03160
• Genome accession: NZ_LR594035
• Coordinates: 569869..570870 (+)
• Length: 333 a.a.
• NCBI ID: WP_007893523.1
• Uniprot ID: -
• Organism: Streptococcus pseudoporcinus strain NCTC5385
• Function: require for competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	571608..572741	569869..570870	flank	738

Gene organization within MGE regions

Location: 569869..572741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL04_RS03160 (NCTC5385_00670)	ccpA	569869..570870 (+)	1002	WP_007893523.1	catabolite control protein A	Regulator
FGL04_RS03165	-	570916..571569 (+)	654	Protein_594	alpha-amylase family glycosyl hydrolase	-
FGL04_RS03170 (NCTC5385_00673)	-	571608..572741 (-)	1134	Protein_595	IS3 family transposase	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36648.69 Da
• Isoelectric Point: 5.3073

>NTDB_id=1127289 FGL04_RS03160 WP_007893523.1 569869..570870(+) (ccpA) [Streptococcus pseudoporcinus strain NCTC5385]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAVSEVVDILAEKHQNIAFVSGPLIDEINGKVRLSGYKEGLKQNKLDYKEGLVFEANYSYKDGFELAQRVINSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVVEYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKRRGTTK

Nucleotide

• Length: 1002 bp

>NTDB_id=1127289 FGL04_RS03160 WP_007893523.1 569869..570870(+) (ccpA) [Streptococcus pseudoporcinus strain NCTC5385]
ATGAACACAGATGATACTATCACGATTTACGATGTTGCTCGTGAAGCGGGTGTTTCAATGGCAACTGTTAGCCGTGTTGT
AAATGGAAATAAAAATGTTAAAGAAAATACACGTAAGAAAGTATTAGAAGTTATCGATCGTTTAGATTATCGCCCTAATG
CAGTTGCTCGTGGTCTTGCAAGTAAAAAAACAACAACAGTTGGAGTAGTTATTCCTAATATTGCTAACGCCTACTTTTCA
ATCCTTGCTAAGGGAATTGATGACATTGCAGCCATGTATAAATATAACATCGTTTTAGCTTCAAGTGATGAAGACGATGA
TAAAGAAGTTAATGTTGTTAATACCTTATTTGCTAAGCAAGTTGATGGCATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGTGCAGAATTTTCACGGTCTAGAACCCCAATTGTATTAGCTGGAACTGTCGATTTAGAGCATCAGTTGCCAAGT
GTCAATATTGATTATAAAGCAGCTGTTTCTGAGGTAGTTGATATTTTAGCAGAAAAACATCAAAACATTGCTTTTGTATC
AGGGCCATTAATTGATGAAATCAATGGTAAGGTAAGACTCTCTGGCTATAAAGAAGGCTTGAAGCAAAATAAATTGGACT
ATAAAGAAGGCCTTGTTTTTGAAGCTAACTACTCTTATAAAGACGGCTTTGAGTTAGCACAACGGGTTATCAACTCTGGG
GCAACAGCTGCCTATGTAGGGGAGGATGAACTAGCAGCAGGCTTATTAAACGGTCTCTTTGCAGCAGGCAAGAGTGTTCC
AGAAGACTTTGAAATTATTACAAGTAATGATTCCCCAGTCGTAGAATATACCCGTCCAAATCTAAGTTCAATTAGTCAAC
CTGTATATGATTTGGGTGCCGTAAGCATGCGTATGTTAACTAAAATCATGAATAAAGAAGAGTTAGAAGAAAAAGAAATT
TTGTTAAATCATGGCATTAAACGTCGTGGCACAACGAAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (8-53)

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus gordonii str. Challis substr. CH1	78.378	100	0.784
ccpA	Streptococcus pneumoniae D39	76.877	100	0.769
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	54.985	99.399	0.547