Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   EL305_RS11365 Genome accession   NZ_LR134528
Coordinates   1908588..1909232 (+) Length   214 a.a.
NCBI ID   WP_002226073.1    Uniprot ID   A0A378VTS6
Organism   Neisseria meningitidis strain NCTC12163     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1903588..1914232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL305_RS11340 (NCTC12163_01902) putP 1903795..1905321 (-) 1527 WP_002236704.1 sodium/proline symporter PutP -
  EL305_RS11350 (NCTC12163_01903) - 1905804..1906124 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  EL305_RS11355 (NCTC12163_01904) comM 1906138..1907634 (+) 1497 WP_126418105.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  EL305_RS11360 (NCTC12163_01905) ftsN 1907740..1908585 (+) 846 WP_002226072.1 cell division protein FtsN -
  EL305_RS11365 (NCTC12163_01906) dsbA1 1908588..1909232 (+) 645 WP_002226073.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  EL305_RS11370 (NCTC12163_01907) - 1909265..1910086 (+) 822 WP_002226074.1 undecaprenyl-diphosphate phosphatase -
  EL305_RS11390 (NCTC12163_01910) - 1910668..1911858 (-) 1191 WP_050389241.1 class I SAM-dependent methyltransferase -
  EL305_RS11395 (NCTC12163_01911) mraZ 1912164..1912619 (+) 456 WP_002212482.1 division/cell wall cluster transcriptional repressor MraZ -
  EL305_RS11400 (NCTC12163_01912) rsmH 1912616..1913602 (+) 987 WP_126418107.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  EL305_RS11405 (NCTC12163_01913) ftsL 1913599..1913862 (+) 264 WP_002220363.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23967.99 Da        Isoelectric Point: 9.8294

>NTDB_id=1124048 EL305_RS11365 WP_002226073.1 1908588..1909232(+) (dsbA1) [Neisseria meningitidis strain NCTC12163]
MKLKHLLPLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1124048 EL305_RS11365 WP_002226073.1 1908588..1909232(+) (dsbA1) [Neisseria meningitidis strain NCTC12163]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAAGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378VTS6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.684

87.383

0.495
  dsbA2 Neisseria meningitidis MC58

51.075

86.916

0.444

Multiple sequence alignment