Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | EL310_RS12085 | Genome accession | NZ_LR134522 |
| Coordinates | 2051215..2051664 (+) | Length | 149 a.a. |
| NCBI ID | WP_002237378.1 | Uniprot ID | A0A0U1RHA9 |
| Organism | Neisseria meningitidis strain NCTC3372 | ||
| Function | DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2046215..2056664
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL310_RS12080 (NCTC3372_02042) | comE | 2050663..2051127 (+) | 465 | WP_010981060.1 | ComEA family DNA-binding protein | Machinery gene |
| EL310_RS12085 (NCTC3372_02043) | comP | 2051215..2051664 (+) | 450 | WP_002237378.1 | type IV pilin protein | Machinery gene |
| EL310_RS13720 (NCTC3372_02044) | - | 2051754..2052148 (-) | 395 | Protein_2008 | 5'-nucleotidase | - |
| EL310_RS12095 (NCTC3372_02045) | - | 2052219..2052431 (-) | 213 | WP_002234366.1 | SWIM zinc finger family protein | - |
| EL310_RS12100 (NCTC3372_02046) | - | 2052721..2053776 (+) | 1056 | WP_002221681.1 | DNA cytosine methyltransferase | - |
| EL310_RS12105 (NCTC3372_02047) | - | 2053790..2055436 (+) | 1647 | WP_002237377.1 | TIGR02391 family protein | - |
| EL310_RS12110 (NCTC3372_02048) | - | 2055440..2055862 (+) | 423 | WP_002246501.1 | very short patch repair endonuclease | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16864.83 Da Isoelectric Point: 9.7951
>NTDB_id=1123884 EL310_RS12085 WP_002237378.1 2051215..2051664(+) (comP) [Neisseria meningitidis strain NCTC3372]
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINTVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINTVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK
Nucleotide
Download Length: 450 bp
>NTDB_id=1123884 EL310_RS12085 WP_002237378.1 2051215..2051664(+) (comP) [Neisseria meningitidis strain NCTC3372]
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATACAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCCTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATACAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCCTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Neisseria gonorrhoeae MS11 |
99.329 |
100 |
0.993 |
| comP | Neisseria meningitidis 8013 |
98.658 |
100 |
0.987 |
| comP | Neisseria subflava NJ9703 |
48.98 |
98.658 |
0.483 |