Detailed information NTG1123784

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EL264_RS02445
• Genome accession: NZ_LR134519
• Coordinates: 505336..506136 (+)
• Length: 266 a.a.
• NCBI ID: WP_126474159.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain NCTC12823
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 500336..511136

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL264_RS02410 (NCTC12823_00483)	pseH	500836..501378 (+)	543	WP_079357342.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
EL264_RS02415 (NCTC12823_00484)	-	501311..502249 (-)	939	WP_126474155.1	tetraacyldisaccharide 4'-kinase	-
EL264_RS02420 (NCTC12823_00485)	-	502246..503028 (-)	783	WP_126474156.1	NAD+ synthase	-
EL264_RS02430 (NCTC12823_00487)	ilvC	503277..504269 (+)	993	WP_126474157.1	ketol-acid reductoisomerase	-
EL264_RS02435 (NCTC12823_00488)	minD	504293..505099 (+)	807	WP_126474158.1	septum site-determining protein MinD	-
EL264_RS02440 (NCTC12823_00489)	minE	505096..505329 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
EL264_RS02445 (NCTC12823_00490)	dprA	505336..506136 (+)	801	WP_126474159.1	DNA-processing protein DprA	Machinery gene
EL264_RS02450 (NCTC12823_00491)	dprB	506133..506537 (+)	405	WP_126474160.1	Holliday junction resolvase RuvX	Machinery gene
EL264_RS02455	-	506667..507132 (+)	466	Protein_471	tetratricopeptide repeat protein	-
EL264_RS02460 (NCTC12823_00493)	-	507320..507658 (+)	339	WP_126474161.1	hypothetical protein	-
EL264_RS02465 (NCTC12823_00494)	-	507642..508202 (+)	561	WP_126474162.1	hypothetical protein	-
EL264_RS02470 (NCTC12823_00495)	-	508316..509197 (-)	882	WP_126474163.1	RluA family pseudouridine synthase	-
EL264_RS02475 (NCTC12823_00496)	recJ	509197..510747 (-)	1551	WP_126474164.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29835.82 Da
• Isoelectric Point: 9.1322

>NTDB_id=1123784 EL264_RS02445 WP_126474159.1 505336..506136(+) (dprA) [Helicobacter pylori strain NCTC12823]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=1123784 EL264_RS02445 WP_126474159.1 505336..506136(+) (dprA) [Helicobacter pylori strain NCTC12823]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTGAGAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTCATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCTTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414