Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | EL264_RS02450 | Genome accession | NZ_LR134519 |
| Coordinates | 506133..506537 (+) | Length | 134 a.a. |
| NCBI ID | WP_126474160.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain NCTC12823 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 501133..511537
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL264_RS02415 (NCTC12823_00484) | - | 501311..502249 (-) | 939 | WP_126474155.1 | tetraacyldisaccharide 4'-kinase | - |
| EL264_RS02420 (NCTC12823_00485) | - | 502246..503028 (-) | 783 | WP_126474156.1 | NAD+ synthase | - |
| EL264_RS02430 (NCTC12823_00487) | ilvC | 503277..504269 (+) | 993 | WP_126474157.1 | ketol-acid reductoisomerase | - |
| EL264_RS02435 (NCTC12823_00488) | minD | 504293..505099 (+) | 807 | WP_126474158.1 | septum site-determining protein MinD | - |
| EL264_RS02440 (NCTC12823_00489) | minE | 505096..505329 (+) | 234 | WP_000051414.1 | cell division topological specificity factor MinE | - |
| EL264_RS02445 (NCTC12823_00490) | dprA | 505336..506136 (+) | 801 | WP_126474159.1 | DNA-processing protein DprA | Machinery gene |
| EL264_RS02450 (NCTC12823_00491) | dprB | 506133..506537 (+) | 405 | WP_126474160.1 | Holliday junction resolvase RuvX | Machinery gene |
| EL264_RS02455 | - | 506667..507132 (+) | 466 | Protein_471 | tetratricopeptide repeat protein | - |
| EL264_RS02460 (NCTC12823_00493) | - | 507320..507658 (+) | 339 | WP_126474161.1 | hypothetical protein | - |
| EL264_RS02465 (NCTC12823_00494) | - | 507642..508202 (+) | 561 | WP_126474162.1 | hypothetical protein | - |
| EL264_RS02470 (NCTC12823_00495) | - | 508316..509197 (-) | 882 | WP_126474163.1 | RluA family pseudouridine synthase | - |
| EL264_RS02475 (NCTC12823_00496) | recJ | 509197..510747 (-) | 1551 | WP_126474164.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15204.66 Da Isoelectric Point: 8.7185
>NTDB_id=1123785 EL264_RS02450 WP_126474160.1 506133..506537(+) (dprB) [Helicobacter pylori strain NCTC12823]
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASKDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASKDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=1123785 EL264_RS02450 WP_126474160.1 506133..506537(+) (dprB) [Helicobacter pylori strain NCTC12823]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCGCTTTTAAACGGCGTTATCTTGCCCTTAGAAGC
GATTTTACGCCACAACAGGAATCAGGCCTCTAAGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAACCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCGCTTTTAAACGGCGTTATCTTGCCCTTAGAAGC
GATTTTACGCCACAACAGGAATCAGGCCTCTAAGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAACCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
97.761 |
100 |
0.978 |