Detailed information NTG1123759

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EL256_RS05820
• Genome accession: NZ_LR134517
• Coordinates: 1209866..1210666 (-)
• Length: 266 a.a.
• NCBI ID: WP_126443225.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain NCTC13345
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1204866..1215666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL256_RS05790 (NCTC13345_01139)	recJ	1204980..1206530 (+)	1551	WP_126443217.1	single-stranded-DNA-specific exonuclease RecJ	-
EL256_RS05795 (NCTC13345_01140)	-	1206530..1207411 (+)	882	WP_126443219.1	RluA family pseudouridine synthase	-
EL256_RS05800 (NCTC13345_01141)	-	1207511..1208071 (-)	561	WP_126443221.1	hypothetical protein	-
EL256_RS05805 (NCTC13345_01142)	-	1208055..1208393 (-)	339	WP_000699881.1	hypothetical protein	-
EL256_RS05810 (NCTC13345_01143)	-	1208508..1209179 (-)	672	WP_126443223.1	tetratricopeptide repeat protein	-
EL256_RS05815 (NCTC13345_01144)	dprB	1209465..1209869 (-)	405	WP_001967448.1	Holliday junction resolvase RuvX	Machinery gene
EL256_RS05820 (NCTC13345_01145)	dprA	1209866..1210666 (-)	801	WP_126443225.1	DNA-processing protein DprA	Machinery gene
EL256_RS05825 (NCTC13345_01146)	minE	1210673..1210906 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
EL256_RS05830 (NCTC13345_01147)	minD	1210903..1211709 (-)	807	WP_064437350.1	septum site-determining protein MinD	-
EL256_RS05835 (NCTC13345_01148)	ilvC	1211728..1212720 (-)	993	WP_126443227.1	ketol-acid reductoisomerase	-
EL256_RS05845 (NCTC13345_01150)	-	1212969..1213751 (+)	783	WP_126443229.1	NAD+ synthase	-
EL256_RS05850 (NCTC13345_01151)	-	1213748..1214686 (+)	939	WP_126443231.1	tetraacyldisaccharide 4'-kinase	-
EL256_RS05855 (NCTC13345_01152)	pseH	1214619..1215161 (-)	543	WP_120911670.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29893.86 Da
• Isoelectric Point: 8.5826

>NTDB_id=1123759 EL256_RS05820 WP_126443225.1 1209866..1210666(-) (dprA) [Helicobacter pylori strain NCTC13345]
MKSHFQYSVLENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=1123759 EL256_RS05820 WP_126443225.1 1209866..1210666(-) (dprA) [Helicobacter pylori strain NCTC13345]
ATGAAAAGCCACTTCCAATACAGCGTGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCCTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGTGCGAGATTAGCCCAGAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (13-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.744	100	0.977
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414