Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   EL216_RS10685 Genome accession   NZ_LR134440
Coordinates   2266802..2267509 (+) Length   235 a.a.
NCBI ID   WP_085390292.1    Uniprot ID   -
Organism   Neisseria animaloris strain NCTC12228     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2261802..2272509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL216_RS10660 (NCTC12228_02152) - 2262635..2263435 (+) 801 WP_085390287.1 NUDIX domain-containing protein -
  EL216_RS10665 (NCTC12228_02153) - 2263511..2263951 (+) 441 WP_085390288.1 hypothetical protein -
  EL216_RS10670 (NCTC12228_02154) - 2264072..2264353 (+) 282 WP_085390289.1 accessory factor UbiK family protein -
  EL216_RS10675 (NCTC12228_02155) comM 2264370..2265860 (+) 1491 WP_085390290.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  EL216_RS10680 (NCTC12228_02156) - 2265970..2266779 (+) 810 WP_085390291.1 SPOR domain-containing protein -
  EL216_RS10685 (NCTC12228_02157) dsbA2 2266802..2267509 (+) 708 WP_085390292.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  EL216_RS10690 (NCTC12228_02158) - 2267603..2268430 (+) 828 WP_085390293.1 undecaprenyl-diphosphate phosphatase -
  EL216_RS10695 (NCTC12228_02159) - 2268608..2268955 (-) 348 WP_085390294.1 MliC family protein -
  EL216_RS10700 (NCTC12228_02160) - 2269135..2269320 (-) 186 WP_085390295.1 zinc-finger domain-containing protein -
  EL216_RS10705 (NCTC12228_02161) - 2269413..2270345 (-) 933 WP_085390296.1 branched-chain amino acid transaminase -
  EL216_RS10710 (NCTC12228_02162) - 2270635..2270949 (+) 315 WP_085390297.1 lipopolysaccharide assembly LapA domain-containing protein -
  EL216_RS10715 (NCTC12228_02163) lapB 2270956..2272125 (+) 1170 WP_085390298.1 lipopolysaccharide assembly protein LapB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 25680.72 Da        Isoelectric Point: 9.9449

>NTDB_id=1122874 EL216_RS10685 WP_085390292.1 2266802..2267509(+) (dsbA2) [Neisseria animaloris strain NCTC12228]
MKLKTVLLTAVAALALTANVYAATEGKDYTVLPKPIPQSQADKIEVLEFFGYFCVHCYHLDPVLLKHAKTFPSDTYLRTE
HVVWQPEMLGFARVAAAVNSSGLKYQANQAVFRAVYEEKINLADSATFKQWAAAQKGFDGKKLIAAYDSFGNQAQAKRME
DLTNTYQISGTPTVIVGGKYQVKFTGDWQAGMKTIDELVAKVRTERGMKTPSAKPVAVAPALKSKGALLAKAANK

Nucleotide


Download         Length: 708 bp        

>NTDB_id=1122874 EL216_RS10685 WP_085390292.1 2266802..2267509(+) (dsbA2) [Neisseria animaloris strain NCTC12228]
ATGAAATTGAAAACCGTATTGCTGACCGCCGTTGCAGCATTGGCATTGACAGCTAATGTTTACGCGGCGACTGAAGGTAA
AGATTATACCGTATTACCCAAGCCGATTCCTCAGAGCCAGGCAGATAAAATCGAGGTATTGGAGTTTTTCGGTTATTTCT
GCGTACATTGTTATCACTTGGATCCTGTGCTCCTGAAGCATGCAAAAACATTCCCTTCAGACACTTATCTGCGTACCGAA
CATGTTGTATGGCAACCTGAAATGCTGGGGTTCGCACGTGTGGCGGCTGCAGTAAACAGTTCAGGTTTGAAATACCAGGC
CAATCAGGCCGTATTCCGTGCGGTTTATGAAGAGAAAATCAATTTGGCCGATTCTGCGACCTTTAAGCAATGGGCGGCAG
CCCAAAAGGGTTTTGATGGCAAAAAACTGATTGCCGCCTATGACTCTTTCGGCAATCAAGCCCAAGCGAAAAGAATGGAA
GATTTGACCAATACCTATCAAATCAGCGGTACTCCGACAGTTATCGTCGGTGGTAAATACCAAGTGAAATTTACCGGCGA
CTGGCAGGCAGGGATGAAAACAATTGATGAATTGGTAGCAAAAGTCCGTACCGAGCGTGGTATGAAAACGCCTTCTGCCA
AGCCGGTTGCAGTTGCACCTGCTTTGAAAAGCAAAGGGGCATTGCTTGCAAAGGCTGCCAACAAATAA

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(87-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

61.749

77.872

0.481
  dsbA1 Neisseria meningitidis MC58

59.239

78.298

0.464

Multiple sequence alignment