Detailed information
Bioinformatically predicted
Overview
| Name | comC | Type | Machinery gene |
| Locus tag | EL190_RS03455 | Genome accession | NZ_LR134395 |
| Coordinates | 659909..660430 (+) | Length | 173 a.a. |
| NCBI ID | WP_005662592.1 | Uniprot ID | - |
| Organism | Haemophilus aegyptius strain NCTC8134 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 654909..665430
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL190_RS03435 (NCTC8134_00697) | - | 654991..655836 (-) | 846 | WP_006995138.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| EL190_RS03440 (NCTC8134_00698) | - | 655909..658509 (-) | 2601 | WP_006995137.1 | penicillin-binding protein 1A | - |
| EL190_RS03445 (NCTC8134_00700) | - | 658608..659405 (+) | 798 | Protein_660 | competence protein ComA | - |
| EL190_RS03450 (NCTC8134_00701) | comB | 659406..659912 (+) | 507 | WP_006995134.1 | competence protein ComB | Machinery gene |
| EL190_RS03455 (NCTC8134_00702) | comC | 659909..660430 (+) | 522 | WP_005662592.1 | competence protein ComC | Machinery gene |
| EL190_RS03460 (NCTC8134_00703) | comD | 660427..660840 (+) | 414 | WP_006995133.1 | pilus assembly protein PilP | Machinery gene |
| EL190_RS03465 (NCTC8134_00704) | comE | 660850..662187 (+) | 1338 | WP_006995132.1 | type IV pilus secretin PilQ | Machinery gene |
| EL190_RS03470 (NCTC8134_00705) | - | 662200..662886 (+) | 687 | WP_006995131.1 | ComF family protein | - |
| EL190_RS03475 (NCTC8134_00706) | nfuA | 662962..663558 (+) | 597 | WP_006995130.1 | Fe-S biogenesis protein NfuA | - |
| EL190_RS03480 | nudC | 663625..664420 (+) | 796 | Protein_667 | NAD(+) diphosphatase | - |
| EL190_RS03485 (NCTC8134_00709) | - | 664456..665046 (+) | 591 | WP_006995127.1 | YjaG family protein | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19961.15 Da Isoelectric Point: 10.1286
>NTDB_id=1122723 EL190_RS03455 WP_005662592.1 659909..660430(+) (comC) [Haemophilus aegyptius strain NCTC8134]
MKAFFNDPLTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKRSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDSPL
QTEIIFQLDRETK
MKAFFNDPLTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKRSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDSPL
QTEIIFQLDRETK
Nucleotide
Download Length: 522 bp
>NTDB_id=1122723 EL190_RS03455 WP_005662592.1 659909..660430(+) (comC) [Haemophilus aegyptius strain NCTC8134]
ATGAAAGCTTTTTTTAACGATCCTTTGACTCCTTTTGGAAAATGGCTAAGTCAGCCTTTTTATGTGCACGGTTTAACCTT
TTTATTGCTATTAAGTGCGGTGATTTTTCGCCCCGTTTTAGATTATATCGAGGGGAGTTCACGTTTCCATGAAATTGAAA
ATGAGTTAGCGGTGAAACGTTCAGAATTGTTGCATCAACAGAAAATTTTAACTTCTTTACAGCAGCAATCGGAAAGTCGA
AAACTTTCTCCAGAACTGGCTGCACAAATTATTCCTTTGAATAAACAAATTCAACGTTTAGCTGCACGCAACGGTTTATC
TCAGCATTTACGTTGGGAAATGGGGCAAAAGCCTATTTTGCATTTACAGCTTACAGGTCATTTTGAGAAAACGAAGACAT
TTTTAACCGCACTTTTGGCTAATTCGTCACAGCTTTCAGTGAGTCGCTTGCAGTTTATCAAACCCGAAGACAGCCCATTG
CAAACCGAGATTATTTTTCAGTTAGATAGGGAGACAAAATGA
ATGAAAGCTTTTTTTAACGATCCTTTGACTCCTTTTGGAAAATGGCTAAGTCAGCCTTTTTATGTGCACGGTTTAACCTT
TTTATTGCTATTAAGTGCGGTGATTTTTCGCCCCGTTTTAGATTATATCGAGGGGAGTTCACGTTTCCATGAAATTGAAA
ATGAGTTAGCGGTGAAACGTTCAGAATTGTTGCATCAACAGAAAATTTTAACTTCTTTACAGCAGCAATCGGAAAGTCGA
AAACTTTCTCCAGAACTGGCTGCACAAATTATTCCTTTGAATAAACAAATTCAACGTTTAGCTGCACGCAACGGTTTATC
TCAGCATTTACGTTGGGAAATGGGGCAAAAGCCTATTTTGCATTTACAGCTTACAGGTCATTTTGAGAAAACGAAGACAT
TTTTAACCGCACTTTTGGCTAATTCGTCACAGCTTTCAGTGAGTCGCTTGCAGTTTATCAAACCCGAAGACAGCCCATTG
CAAACCGAGATTATTTTTCAGTTAGATAGGGAGACAAAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC | Haemophilus influenzae 86-028NP |
98.266 |
100 |
0.983 |
| comC | Haemophilus influenzae Rd KW20 |
97.11 |
100 |
0.971 |