Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   EL203_RS03655 Genome accession   NZ_LR134383
Coordinates   765434..766096 (+) Length   220 a.a.
NCBI ID   WP_058470470.1    Uniprot ID   -
Organism   Legionella jordanis strain NCTC11533     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 760434..771096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL203_RS03630 (NCTC11533_00745) - 761327..761602 (+) 276 WP_058470474.1 hypothetical protein -
  EL203_RS03635 (NCTC11533_00746) - 761617..762690 (+) 1074 WP_058470473.1 RIP metalloprotease -
  EL203_RS03640 (NCTC11533_00747) comFC 762692..763381 (-) 690 WP_232004057.1 ComF family protein Machinery gene
  EL203_RS03645 (NCTC11533_00748) bioC 763426..764289 (+) 864 WP_058470472.1 malonyl-ACP O-methyltransferase BioC -
  EL203_RS03650 (NCTC11533_00749) phhA 764384..765202 (+) 819 WP_058470471.1 phenylalanine 4-monooxygenase -
  EL203_RS03655 (NCTC11533_00750) letA 765434..766096 (+) 663 WP_058470470.1 two-component system response regulator LetA Regulator
  EL203_RS03660 (NCTC11533_00751) uvrC 766197..768041 (+) 1845 WP_058470469.1 excinuclease ABC subunit UvrC -
  EL203_RS03665 (NCTC11533_00752) - 768060..769130 (-) 1071 WP_122224911.1 alpha/beta fold hydrolase -
  EL203_RS03670 (NCTC11533_00753) - 769336..770061 (+) 726 WP_058470468.1 L,D-transpeptidase -
  EL203_RS03675 (NCTC11533_00754) - 770058..770618 (+) 561 WP_058470467.1 hypothetical protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24625.75 Da        Isoelectric Point: 5.6937

>NTDB_id=1122551 EL203_RS03655 WP_058470470.1 765434..766096(+) (letA) [Legionella jordanis strain NCTC11533]
MIKVLIVDDHALVRMGIRRLLEDMPDVEVVADAESGEQALTLVKSHKPDVVLLDMKMPGIDGWEVTRRLKKTNPLVKVIA
VTAVCAEPMPTRVLQLGAMGYLTKESGAEEMAAAIRKVARGEKYLSAEIAQKMAINSLEATQDSPFDSLSEREMQVMLMI
TSGMTVQDIADRLFLSSKTINGYRYRMFEKLGIKNDVELTFLAMKHRVIEQPNDALHDEH

Nucleotide


Download         Length: 663 bp        

>NTDB_id=1122551 EL203_RS03655 WP_058470470.1 765434..766096(+) (letA) [Legionella jordanis strain NCTC11533]
TTGATAAAAGTTCTAATTGTTGATGACCATGCCCTAGTCAGAATGGGTATTCGACGATTATTGGAAGATATGCCAGATGT
TGAGGTGGTAGCAGACGCTGAAAGTGGCGAACAAGCTTTAACGTTAGTCAAATCCCATAAACCTGATGTGGTACTGCTGG
ATATGAAAATGCCAGGGATAGATGGTTGGGAGGTGACAAGGCGTCTTAAGAAAACCAATCCTCTGGTTAAAGTGATTGCC
GTTACGGCTGTCTGTGCTGAGCCAATGCCGACGCGTGTCCTGCAATTAGGGGCAATGGGTTATCTAACCAAAGAATCCGG
CGCTGAAGAAATGGCCGCAGCCATTCGCAAAGTGGCAAGAGGTGAGAAATATTTAAGTGCCGAAATCGCGCAAAAAATGG
CTATTAACAGTTTGGAAGCCACGCAAGACTCACCGTTTGATTCCCTATCTGAACGGGAAATGCAAGTGATGCTGATGATC
ACCAGTGGTATGACAGTACAGGATATTGCTGATCGTTTATTCTTGAGCTCCAAAACCATCAATGGCTATCGTTACCGCAT
GTTTGAAAAATTGGGTATTAAAAATGATGTGGAGTTGACGTTTCTGGCTATGAAACATCGAGTGATTGAACAACCCAATG
ATGCCTTGCATGATGAACATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

88.584

99.545

0.882
  letA Legionella pneumophila strain ERS1305867

88.584

99.545

0.882

Multiple sequence alignment