Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | EL201_RS04880 | Genome accession | NZ_LR134380 |
| Coordinates | 1056984..1057583 (+) | Length | 199 a.a. |
| NCBI ID | WP_027221266.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pascullei strain NCTC12273 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1051984..1062583
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL201_RS04865 (NCTC12273_00973) | - | 1053922..1054935 (-) | 1014 | WP_027221263.1 | hypothetical protein | - |
| EL201_RS04870 (NCTC12273_00974) | pilM | 1055354..1056418 (+) | 1065 | WP_027221264.1 | pilus assembly protein PilM | Machinery gene |
| EL201_RS04875 (NCTC12273_00975) | pilN | 1056422..1056970 (+) | 549 | WP_027221265.1 | PilN domain-containing protein | Machinery gene |
| EL201_RS04880 (NCTC12273_00976) | pilO | 1056984..1057583 (+) | 600 | WP_027221266.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EL201_RS04885 (NCTC12273_00977) | pilP | 1057580..1058164 (+) | 585 | WP_027221267.1 | pilus assembly protein PilP | Machinery gene |
| EL201_RS04890 (NCTC12273_00978) | pilQ | 1058168..1060264 (+) | 2097 | WP_027221268.1 | type IV pilus secretin PilQ | Machinery gene |
| EL201_RS04895 (NCTC12273_00979) | aroK | 1060707..1061234 (+) | 528 | WP_032828804.1 | shikimate kinase AroK | - |
| EL201_RS04900 (NCTC12273_00980) | aroB | 1061221..1062324 (+) | 1104 | WP_027221270.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22441.13 Da Isoelectric Point: 5.3305
>NTDB_id=1122493 EL201_RS04880 WP_027221266.1 1056984..1057583(+) (pilO) [Legionella pneumophila subsp. pascullei strain NCTC12273]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=1122493 EL201_RS04880 WP_027221266.1 1056984..1057583(+) (pilO) [Legionella pneumophila subsp. pascullei strain NCTC12273]
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGAACCATGCTAAAACAACTCCCGGCAAAAAATGAAATGCCTGGGCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTTGCTGAAATGAACAGA
ATCGTGACTTTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACTGCTAAAATATACAGATATCGGGCACAATGA
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGAACCATGCTAAAACAACTCCCGGCAAAAAATGAAATGCCTGGGCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTTGCTGAAATGAACAGA
ATCGTGACTTTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACTGCTAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
97.487 |
100 |
0.975 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |